Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC093655.2-201ENST00000425735 631 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 MRPL50P1-201ENST00000431951 384 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN9P43378 AC008410.1-201ENST00000483777 339 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 SUMO2P4-201ENST00000504193 276 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN9P43378 AC006427.1-201ENST00000514359 712 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 EIF3KP3-201ENST00000514461 639 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 SOX5P1-201ENST00000524155 1127 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTPN9P43378 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN9P43378 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN9P43378 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN9P43378 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN9P43378 IMMP1LP3-201ENST00000604197 224 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 AC011626.1-201ENST00000604710 562 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 AC022960.3-201ENST00000619794 441 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 AC009269.6-201ENST00000621778 588 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN9P43378 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN9P43378 CASC19-264ENST00000641912 1184 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 AC006210.2-201ENST00000367074 1545 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PTPN9P43378 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN9P43378 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN9P43378 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.51□□□□□ -1.53
PTPN9P43378 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN9P43378 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN9P43378 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PTPN9P43378 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN9P43378 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 AC007342.5-201ENST00000571340 2142 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 AC092747.4-201ENST00000620519 1861 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 AP000568.1-201ENST00000282964 442 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN9P43378 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PTPN9P43378 SNORA67-201ENST00000384423 137 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 RN7SKP59-201ENST00000410520 314 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 RPL26P37-201ENST00000411983 438 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 NPM1P4-201ENST00000414095 812 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN9P43378 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPN9P43378 MTCO2P1-201ENST00000424648 477 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 CFL1P1-202ENST00000432948 411 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 CLUHP1-201ENST00000435012 1190 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 MTCYBP29-201ENST00000436327 1006 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 SETP6-201ENST00000479329 568 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 AC098583.1-201ENST00000480875 255 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 OR11I1P-201ENST00000486033 954 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 ATP5LP3-201ENST00000514223 304 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 RN7SKP34-201ENST00000516142 244 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN9P43378 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN9P43378 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN9P43378 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.5□□□□□ -1.53
PTPN9P43378 DUX4L52-201ENST00000549363 777 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 AC025918.2-201ENST00000558683 763 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPN9P43378 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PTPN9P43378 FKBP1AP1-201ENST00000594588 318 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 AC069307.1-201ENST00000602820 447 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 AL159169.2-201ENST00000610061 1269 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 MIR6768-201ENST00000610734 72 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 AC008759.3-201ENST00000613300 508 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 AC090527.3-201ENST00000619041 548 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 AL445528.2-201ENST00000620582 470 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN9P43378 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN9P43378 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.5□□□□□ -1.53
PTPN9P43378 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PTPN9P43378 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN9P43378 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN9P43378 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN9P43378 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN9P43378 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.49□□□□□ -1.53
PTPN9P43378 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN9P43378 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
PTPN9P43378 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.49□□□□□ -1.53
PTPN9P43378 SNORA72.3-201ENST00000365074 132 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 RNU1-74P-201ENST00000384108 171 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AC092642.1-201ENST00000392417 425 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN9P43378 RSL24D1P1-201ENST00000404972 493 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.49□□□□□ -1.53
PTPN9P43378 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.49□□□□□ -1.53
PTPN9P43378 HYALP1-201ENST00000417674 1279 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 PTP4A1P1-201ENST00000420539 515 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms