Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 SNORA51.8-201ENST00000384234 132 ntBASIC4.89□□□□□ -1.63
RORAP35398 MIR589-201ENST00000385238 99 ntBASIC4.89□□□□□ -1.63
RORAP35398 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 GJA6P-201ENST00000415117 1042 ntBASIC4.89□□□□□ -1.63
RORAP35398 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.89□□□□□ -1.63
RORAP35398 HMGB3P10-201ENST00000434734 572 ntBASIC4.89□□□□□ -1.63
RORAP35398 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.89□□□□□ -1.63
RORAP35398 MTND4LP12-201ENST00000448237 295 ntBASIC4.89□□□□□ -1.63
RORAP35398 TRY2P-201ENST00000448860 689 ntBASIC4.89□□□□□ -1.63
RORAP35398 RN7SL189P-201ENST00000468631 289 ntBASIC4.89□□□□□ -1.63
RORAP35398 RN7SL814P-201ENST00000487715 300 ntBASIC4.89□□□□□ -1.63
RORAP35398 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.89□□□□□ -1.63
RORAP35398 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.89□□□□□ -1.63
RORAP35398 RN7SKP260-201ENST00000516907 149 ntBASIC4.89□□□□□ -1.63
RORAP35398 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 AL121839.1-201ENST00000556233 1185 ntBASIC4.89□□□□□ -1.63
RORAP35398 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.89□□□□□ -1.63
RORAP35398 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.89□□□□□ -1.63
RORAP35398 MIR4691-201ENST00000583764 85 ntBASIC4.89□□□□□ -1.63
RORAP35398 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.89□□□□□ -1.63
RORAP35398 AC005229.3-201ENST00000603438 323 ntBASIC4.89□□□□□ -1.63
RORAP35398 AC087468.1-201ENST00000604365 630 ntBASIC4.89□□□□□ -1.63
RORAP35398 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.89□□□□□ -1.63
RORAP35398 EIF3FP1-201ENST00000613970 806 ntBASIC4.89□□□□□ -1.63
RORAP35398 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.89□□□□□ -1.63
RORAP35398 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 AC091905.4-201ENST00000623432 202 ntBASIC4.89□□□□□ -1.63
RORAP35398 AC112694.2-201ENST00000623697 768 ntBASIC4.89□□□□□ -1.63
RORAP35398 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 FRG1EP-201ENST00000634469 770 ntBASIC4.89□□□□□ -1.63
RORAP35398 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
RORAP35398 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RORAP35398 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RORAP35398 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.88□□□□□ -1.63
RORAP35398 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.88□□□□□ -1.63
RORAP35398 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.88□□□□□ -1.63
RORAP35398 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RORAP35398 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.88□□□□□ -1.63
RORAP35398 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RORAP35398 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RORAP35398 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RORAP35398 RN7SKP114-201ENST00000410327 279 ntBASIC4.88□□□□□ -1.63
RORAP35398 AC098592.2-201ENST00000413158 265 ntBASIC4.88□□□□□ -1.63
RORAP35398 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.88□□□□□ -1.63
RORAP35398 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.88□□□□□ -1.63
RORAP35398 HYALP1-201ENST00000417674 1279 ntBASIC4.88□□□□□ -1.63
RORAP35398 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.88□□□□□ -1.63
RORAP35398 RHOT1P3-201ENST00000436571 331 ntBASIC4.88□□□□□ -1.63
RORAP35398 AL772161.1-201ENST00000439130 476 ntBASIC4.88□□□□□ -1.63
RORAP35398 NPM1P39-201ENST00000449818 867 ntBASIC4.88□□□□□ -1.63
RORAP35398 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.88□□□□□ -1.63
RORAP35398 AC091685.2-201ENST00000454924 864 ntBASIC4.88□□□□□ -1.63
RORAP35398 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.88□□□□□ -1.63
RORAP35398 HSPE1P22-201ENST00000456856 327 ntBASIC4.88□□□□□ -1.63
RORAP35398 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.88□□□□□ -1.63
RORAP35398 HMGN2P25-201ENST00000486956 268 ntBASIC4.88□□□□□ -1.63
RORAP35398 IMPA1P1-201ENST00000510718 842 ntBASIC4.88□□□□□ -1.63
RORAP35398 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.88□□□□□ -1.63
RORAP35398 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.88□□□□□ -1.63
RORAP35398 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.88□□□□□ -1.63
RORAP35398 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.88□□□□□ -1.63
RORAP35398 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.88□□□□□ -1.63
RORAP35398 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.88□□□□□ -1.63
RORAP35398 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.88□□□□□ -1.63
RORAP35398 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.88□□□□□ -1.63
RORAP35398 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 RN7SL290P-201ENST00000578661 300 ntBASIC4.88□□□□□ -1.63
RORAP35398 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.88□□□□□ -1.63
RORAP35398 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.88□□□□□ -1.63
RORAP35398 AC011626.1-201ENST00000604710 562 ntBASIC4.88□□□□□ -1.63
RORAP35398 AC096553.1-201ENST00000605169 829 ntBASIC4.88□□□□□ -1.63
RORAP35398 AL354950.1-201ENST00000614150 568 ntBASIC4.88□□□□□ -1.63
RORAP35398 MIR6839-201ENST00000620425 113 ntBASIC4.88□□□□□ -1.63
RORAP35398 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.88□□□□□ -1.63
RORAP35398 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RORAP35398 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RORAP35398 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
RORAP35398 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.88□□□□□ -1.63
RORAP35398 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RORAP35398 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms