Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.85□□□□□ -1.47
CIITAP33076 MIR7155-201ENST00000615925 56 ntBASIC5.85□□□□□ -1.47
CIITAP33076 AC016957.2-201ENST00000616998 848 ntBASIC5.85□□□□□ -1.47
CIITAP33076 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 LINC00216-201ENST00000623548 1126 ntBASIC5.85□□□□□ -1.47
CIITAP33076 AC090772.4-201ENST00000623599 362 ntBASIC5.85□□□□□ -1.47
CIITAP33076 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.85□□□□□ -1.47
CIITAP33076 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 THAP12P4-201ENST00000528321 2266 ntBASIC5.85□□□□□ -1.47
CIITAP33076 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CIITAP33076 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.84□□□□□ -1.47
CIITAP33076 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CIITAP33076 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CIITAP33076 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CIITAP33076 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CIITAP33076 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.84□□□□□ -1.47
CIITAP33076 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CIITAP33076 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CIITAP33076 AC004158.1-201ENST00000564508 4319 ntBASIC5.84□□□□□ -1.47
CIITAP33076 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CIITAP33076 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CIITAP33076 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CIITAP33076 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CIITAP33076 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CIITAP33076 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CIITAP33076 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CIITAP33076 SNURFL-201ENST00000309296 343 ntBASIC5.84□□□□□ -1.47
CIITAP33076 RNA5SP305-201ENST00000362665 119 ntBASIC5.84□□□□□ -1.47
CIITAP33076 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CIITAP33076 RNU6-729P-201ENST00000384399 107 ntBASIC5.84□□□□□ -1.47
CIITAP33076 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CIITAP33076 RN7SKP213-201ENST00000410746 298 ntBASIC5.84□□□□□ -1.47
CIITAP33076 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.84□□□□□ -1.47
CIITAP33076 AL136231.1-201ENST00000429407 730 ntBASIC5.84□□□□□ -1.47
CIITAP33076 RNF2P1-201ENST00000442955 1010 ntBASIC5.84□□□□□ -1.47
CIITAP33076 RPSAP50-201ENST00000481955 852 ntBASIC5.84□□□□□ -1.47
CIITAP33076 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.84□□□□□ -1.47
CIITAP33076 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CIITAP33076 AC110760.3-202ENST00000515177 371 ntBASIC5.84□□□□□ -1.47
CIITAP33076 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.84□□□□□ -1.47
CIITAP33076 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.84□□□□□ -1.47
CIITAP33076 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.84□□□□□ -1.47
CIITAP33076 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.84□□□□□ -1.47
CIITAP33076 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.84□□□□□ -1.47
CIITAP33076 SNORD39.2-201ENST00000579995 76 ntBASIC5.84□□□□□ -1.47
CIITAP33076 OR1AB1P-201ENST00000585564 761 ntBASIC5.84□□□□□ -1.47
CIITAP33076 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.84□□□□□ -1.47
CIITAP33076 ABI1P1-201ENST00000603375 1120 ntBASIC5.84□□□□□ -1.47
CIITAP33076 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.84□□□□□ -1.47
CIITAP33076 AC009163.6-201ENST00000612367 342 ntBASIC5.84□□□□□ -1.47
CIITAP33076 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.84□□□□□ -1.47
CIITAP33076 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.84□□□□□ -1.47
CIITAP33076 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CIITAP33076 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
CIITAP33076 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.84□□□□□ -1.48
CIITAP33076 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.84□□□□□ -1.48
CIITAP33076 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CIITAP33076 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 AP001284.1-201ENST00000528393 2118 ntBASIC5.83□□□□□ -1.48
CIITAP33076 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CIITAP33076 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.83□□□□□ -1.48
CIITAP33076 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.83□□□□□ -1.48
CIITAP33076 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 RNU6-925P-201ENST00000384629 104 ntBASIC5.83□□□□□ -1.48
CIITAP33076 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CIITAP33076 AMZ2P2-201ENST00000406819 1057 ntBASIC5.83□□□□□ -1.48
CIITAP33076 RN7SKP114-201ENST00000410327 279 ntBASIC5.83□□□□□ -1.48
CIITAP33076 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.83□□□□□ -1.48
CIITAP33076 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 AC073310.1-201ENST00000423226 1033 ntBASIC5.83□□□□□ -1.48
CIITAP33076 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.83□□□□□ -1.48
CIITAP33076 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.83□□□□□ -1.48
CIITAP33076 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.83□□□□□ -1.48
CIITAP33076 TVP23BP2-201ENST00000455082 615 ntBASIC5.83□□□□□ -1.48
CIITAP33076 AC090602.1-201ENST00000469695 252 ntBASIC5.83□□□□□ -1.48
CIITAP33076 AC020779.1-201ENST00000478757 796 ntBASIC5.83□□□□□ -1.48
CIITAP33076 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CIITAP33076 OR5M14P-201ENST00000506803 618 ntBASIC5.83□□□□□ -1.48
CIITAP33076 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.83□□□□□ -1.48
CIITAP33076 SEC11B-201ENST00000518383 499 ntBASIC5.83□□□□□ -1.48
CIITAP33076 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CIITAP33076 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CIITAP33076 AC092490.3-201ENST00000545370 572 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms