Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.42□□□□□ -1.54
CAPN3P20807 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CAPN3P20807 AC092162.3-201ENST00000624511 1624 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AL133268.1-201ENST00000405676 1401 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 MTCO1P4-201ENST00000520516 1409 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CAPN3P20807 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CAPN3P20807 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
CAPN3P20807 AC114546.3-201ENST00000623582 1734 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 RN7SKP224-201ENST00000364140 325 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 RNU6-796P-201ENST00000391086 107 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 MIR1203-201ENST00000408812 85 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 RNU4-34P-201ENST00000410431 124 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AL158050.1-201ENST00000416077 457 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AC008173.1-201ENST00000418901 264 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 RPL34P3-201ENST00000421454 338 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 RPL12P34-201ENST00000424532 479 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.41□□□□□ -1.54
CAPN3P20807 MTND2P8-201ENST00000450555 1025 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AC006511.1-201ENST00000470614 315 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 RPL7P40-201ENST00000481703 745 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.41□□□□□ -1.54
CAPN3P20807 AC108043.1-201ENST00000512696 574 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AC133963.2-201ENST00000513686 578 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.41□□□□□ -1.54
CAPN3P20807 RN7SKP253-201ENST00000516424 309 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 RNA5SP34-201ENST00000516887 130 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.41□□□□□ -1.54
CAPN3P20807 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.41□□□□□ -1.54
CAPN3P20807 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.41□□□□□ -1.54
CAPN3P20807 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.41□□□□□ -1.54
CAPN3P20807 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.41□□□□□ -1.54
CAPN3P20807 AC019322.1-201ENST00000571869 389 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AC005244.1-201ENST00000582566 339 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AC006272.2-201ENST00000594725 163 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AC120053.1-201ENST00000607706 736 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 MIR8084-201ENST00000614105 89 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CAPN3P20807 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CAPN3P20807 AL691477.1-201ENST00000624398 162 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 AC106730.3-201ENST00000624568 641 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 CR392039.4-201ENST00000624968 501 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.41□□□□□ -1.54
CAPN3P20807 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.41□□□□□ -1.54
CAPN3P20807 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CAPN3P20807 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CAPN3P20807 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.41□□□□□ -1.54
CAPN3P20807 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CAPN3P20807 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CAPN3P20807 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CAPN3P20807 AL034370.1-201ENST00000397254 1590 ntBASIC5.41□□□□□ -1.54
CAPN3P20807 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CAPN3P20807 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CAPN3P20807 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
CAPN3P20807 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CAPN3P20807 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CAPN3P20807 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.41□□□□□ -1.54
CAPN3P20807 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CAPN3P20807 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CAPN3P20807 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CAPN3P20807 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
CAPN3P20807 MAPK10-328ENST00000641553 4009 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CAPN3P20807 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CAPN3P20807 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CAPN3P20807 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 RNU4-27P-201ENST00000410889 139 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 AC092570.3-201ENST00000420113 693 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 UBE2D3P3-201ENST00000426992 425 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 NANOGP4-201ENST00000427230 913 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 AC073069.1-201ENST00000428657 441 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.4□□□□□ -1.54
CAPN3P20807 RPL12P28-201ENST00000430852 489 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 MTCO1P43-201ENST00000431831 488 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 VN1R110P-201ENST00000438988 971 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CAPN3P20807 RPL21P47-201ENST00000483696 477 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 AC106806.2-201ENST00000509365 500 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 IGKV2-36-201ENST00000519999 223 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.4□□□□□ -1.54
CAPN3P20807 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.4□□□□□ -1.54
CAPN3P20807 AC009237.13-201ENST00000603193 276 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 AC245100.7-201ENST00000609678 442 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 AC123768.4-201ENST00000616244 701 ntBASIC5.4□□□□□ -1.54
CAPN3P20807 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.4□□□□□ -1.54
CAPN3P20807 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.4□□□□□ -1.54
CAPN3P20807 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
CAPN3P20807 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CAPN3P20807 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms