Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 GNG5P2-201ENST00000372054 207 ntBASIC7.14□□□□□ -1.27
LIG1P18858 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 U3.28-201ENST00000391249 210 ntBASIC7.14□□□□□ -1.27
LIG1P18858 RPL23AP17-201ENST00000401064 499 ntBASIC7.14□□□□□ -1.27
LIG1P18858 PRELID1P1-201ENST00000403549 660 ntBASIC7.14□□□□□ -1.27
LIG1P18858 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.14□□□□□ -1.27
LIG1P18858 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.14□□□□□ -1.27
LIG1P18858 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.14□□□□□ -1.27
LIG1P18858 PTP4A1P1-201ENST00000420539 515 ntBASIC7.14□□□□□ -1.27
LIG1P18858 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC7.14□□□□□ -1.27
LIG1P18858 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.14□□□□□ -1.27
LIG1P18858 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 NDUFS5P5-201ENST00000437256 321 ntBASIC7.14□□□□□ -1.27
LIG1P18858 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.14□□□□□ -1.27
LIG1P18858 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.14□□□□□ -1.27
LIG1P18858 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.14□□□□□ -1.27
LIG1P18858 AC112187.1-201ENST00000455837 479 ntBASIC7.14□□□□□ -1.27
LIG1P18858 RNU6-956P-201ENST00000458868 103 ntBASIC7.14□□□□□ -1.27
LIG1P18858 RPSAP39-201ENST00000467439 883 ntBASIC7.14□□□□□ -1.27
LIG1P18858 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.14□□□□□ -1.27
LIG1P18858 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
LIG1P18858 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 AC018645.1-201ENST00000505003 109 ntBASIC7.14□□□□□ -1.27
LIG1P18858 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 AC011416.1-201ENST00000514947 1732 ntBASIC7.14□□□□□ -1.27
LIG1P18858 RNA5SP418-201ENST00000515951 117 ntBASIC7.14□□□□□ -1.27
LIG1P18858 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.14□□□□□ -1.27
LIG1P18858 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.14□□□□□ -1.27
LIG1P18858 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.14□□□□□ -1.27
LIG1P18858 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
LIG1P18858 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.14□□□□□ -1.27
LIG1P18858 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 AC083760.1-201ENST00000589621 670 ntBASIC7.14□□□□□ -1.27
LIG1P18858 AC087683.1-201ENST00000591187 441 ntBASIC7.14□□□□□ -1.27
LIG1P18858 AL606834.2-201ENST00000602954 668 ntBASIC7.14□□□□□ -1.27
LIG1P18858 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 AC006924.1-201ENST00000610750 559 ntBASIC7.14□□□□□ -1.27
LIG1P18858 AC012409.3-201ENST00000611343 981 ntBASIC7.14□□□□□ -1.27
LIG1P18858 AC024941.1-201ENST00000612250 334 ntBASIC7.14□□□□□ -1.27
LIG1P18858 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.14□□□□□ -1.27
LIG1P18858 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
LIG1P18858 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.14□□□□□ -1.27
LIG1P18858 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LIG1P18858 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
LIG1P18858 AC119674.1-202ENST00000641333 1860 ntBASIC7.13□□□□□ -1.27
LIG1P18858 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LIG1P18858 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LIG1P18858 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
LIG1P18858 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.13□□□□□ -1.27
LIG1P18858 PPBPP2-201ENST00000513150 1362 ntBASIC7.13□□□□□ -1.27
LIG1P18858 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.13□□□□□ -1.27
LIG1P18858 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
LIG1P18858 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LIG1P18858 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LIG1P18858 SNORD16-201ENST00000362803 99 ntBASIC7.13□□□□□ -1.27
LIG1P18858 RNU6-1119P-201ENST00000384349 108 ntBASIC7.13□□□□□ -1.27
LIG1P18858 VDAC2P1-201ENST00000399358 958 ntBASIC7.13□□□□□ -1.27
LIG1P18858 VIM2P-201ENST00000402383 1294 ntBASIC7.13□□□□□ -1.27
LIG1P18858 THEM7P-201ENST00000419556 672 ntBASIC7.13□□□□□ -1.27
LIG1P18858 EIF1P1-201ENST00000421436 341 ntBASIC7.13□□□□□ -1.27
LIG1P18858 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LIG1P18858 AC245884.2-201ENST00000426257 404 ntBASIC7.13□□□□□ -1.27
LIG1P18858 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.13□□□□□ -1.27
LIG1P18858 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.13□□□□□ -1.27
LIG1P18858 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.13□□□□□ -1.27
LIG1P18858 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.13□□□□□ -1.27
LIG1P18858 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.13□□□□□ -1.27
LIG1P18858 AC104763.1-201ENST00000475274 360 ntBASIC7.13□□□□□ -1.27
LIG1P18858 AC098583.1-201ENST00000480875 255 ntBASIC7.13□□□□□ -1.27
LIG1P18858 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.13□□□□□ -1.27
LIG1P18858 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.13□□□□□ -1.27
LIG1P18858 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
LIG1P18858 RN7SKP141-201ENST00000516167 338 ntBASIC7.13□□□□□ -1.27
LIG1P18858 RN7SKP183-201ENST00000517169 324 ntBASIC7.13□□□□□ -1.27
LIG1P18858 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.13□□□□□ -1.27
LIG1P18858 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC7.13□□□□□ -1.27
LIG1P18858 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.13□□□□□ -1.27
LIG1P18858 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.13□□□□□ -1.27
LIG1P18858 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.13□□□□□ -1.27
LIG1P18858 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.13□□□□□ -1.27
LIG1P18858 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.13□□□□□ -1.27
LIG1P18858 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.13□□□□□ -1.27
LIG1P18858 AHI1-217ENST00000534469 680 ntTSL 3 BASIC7.13□□□□□ -1.27
LIG1P18858 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.13□□□□□ -1.27
LIG1P18858 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.13□□□□□ -1.27
LIG1P18858 UBE2NP1-201ENST00000545592 458 ntBASIC7.13□□□□□ -1.27
LIG1P18858 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.13□□□□□ -1.27
LIG1P18858 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms