Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 AP000542.2-201ENST00000623199 6179 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.28□□□□□ -1.72
CTLA4P16410 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.28□□□□□ -1.72
CTLA4P16410 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.28□□□□□ -1.72
CTLA4P16410 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 RNU4-4P-201ENST00000364588 130 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CTLA4P16410 UBBP2-201ENST00000376781 231 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 MIR765-201ENST00000390226 114 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 AC007068.1-201ENST00000396690 844 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 RNU2-22P-201ENST00000411266 212 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.28□□□□□ -1.72
CTLA4P16410 VN1R37P-201ENST00000419096 748 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 AC234781.4-201ENST00000419384 244 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 EIF4A1P1-201ENST00000420241 934 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.28□□□□□ -1.72
CTLA4P16410 RPL34P6-201ENST00000432390 345 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 RPS17P8-201ENST00000434525 335 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 AL451139.1-201ENST00000434718 346 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 AC004938.1-201ENST00000438468 308 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 MRPL48P1-201ENST00000445390 636 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 UBE2V2P4-201ENST00000447495 259 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.28□□□□□ -1.72
CTLA4P16410 OR2AF1P-201ENST00000454899 889 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 TPT1P1-201ENST00000458495 518 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.28□□□□□ -1.72
CTLA4P16410 AC073358.1-201ENST00000505671 684 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.28□□□□□ -1.72
CTLA4P16410 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.28□□□□□ -1.72
CTLA4P16410 OR10G5P-201ENST00000532733 358 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 AL121932.1-201ENST00000605542 214 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 EIF3FP1-201ENST00000613970 806 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.28□□□□□ -1.72
CTLA4P16410 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.28□□□□□ -1.72
CTLA4P16410 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CTLA4P16410 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 MRRFP1-201ENST00000435941 1675 ntBASIC4.28□□□□□ -1.72
CTLA4P16410 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CTLA4P16410 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTLA4P16410 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CTLA4P16410 DHX9P1-201ENST00000436565 3076 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.27□□□□□ -1.73
CTLA4P16410 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CTLA4P16410 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTLA4P16410 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTLA4P16410 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTLA4P16410 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
CTLA4P16410 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTLA4P16410 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTLA4P16410 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.27□□□□□ -1.73
CTLA4P16410 RN7SKP95-201ENST00000362860 303 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 ARL4AP5-201ENST00000404372 599 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.27□□□□□ -1.73
CTLA4P16410 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.27□□□□□ -1.73
CTLA4P16410 GNG5P5-201ENST00000420444 220 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTLA4P16410 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTLA4P16410 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.27□□□□□ -1.73
CTLA4P16410 AC073850.1-201ENST00000449243 255 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 CYCSP34-201ENST00000458172 304 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 RNA5SP103-201ENST00000459503 118 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.27□□□□□ -1.73
CTLA4P16410 AC112206.1-201ENST00000468416 477 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.27□□□□□ -1.73
CTLA4P16410 RN7SL629P-201ENST00000489622 285 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.27□□□□□ -1.73
CTLA4P16410 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.27□□□□□ -1.73
CTLA4P16410 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.27□□□□□ -1.73
CTLA4P16410 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.27□□□□□ -1.73
CTLA4P16410 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTLA4P16410 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.27□□□□□ -1.73
CTLA4P16410 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.27□□□□□ -1.73
CTLA4P16410 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.27□□□□□ -1.73
CTLA4P16410 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.27□□□□□ -1.73
CTLA4P16410 AC011453.2-201ENST00000603737 729 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 AC022106.2-201ENST00000620114 757 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.27□□□□□ -1.73
CTLA4P16410 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTLA4P16410 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTLA4P16410 AC092111.2-201ENST00000611627 1414 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CTLA4P16410 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.27□□□□□ -1.73
CTLA4P16410 SOCS5P3-201ENST00000425115 1576 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 AP001642.1-201ENST00000624727 2117 ntBASIC4.27□□□□□ -1.73
CTLA4P16410 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.27□□□□□ -1.73
CTLA4P16410 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.26□□□□□ -1.73
CTLA4P16410 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 AC126323.6-202ENST00000568092 3511 ntBASIC4.26□□□□□ -1.73
CTLA4P16410 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CTLA4P16410 TLK1P1-201ENST00000456760 2440 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms