Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC8.08□□□□□ -1.12
CFTRP13569 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CFTRP13569 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC8.08□□□□□ -1.12
CFTRP13569 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CFTRP13569 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CFTRP13569 AMZ2P2-201ENST00000406819 1057 ntBASIC8.08□□□□□ -1.12
CFTRP13569 RPL23AP26-201ENST00000412728 464 ntBASIC8.08□□□□□ -1.12
CFTRP13569 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC8.08□□□□□ -1.12
CFTRP13569 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC8.08□□□□□ -1.12
CFTRP13569 SCARNA10-201ENST00000459255 330 ntBASIC8.08□□□□□ -1.12
CFTRP13569 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CFTRP13569 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.08□□□□□ -1.12
CFTRP13569 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CFTRP13569 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC8.08□□□□□ -1.12
CFTRP13569 AC006133.1-201ENST00000617106 264 ntBASIC8.08□□□□□ -1.12
CFTRP13569 AP005019.3-201ENST00000620418 560 ntBASIC8.08□□□□□ -1.12
CFTRP13569 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC8.08□□□□□ -1.12
CFTRP13569 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CFTRP13569 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CFTRP13569 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC8.08□□□□□ -1.12
CFTRP13569 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CFTRP13569 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CFTRP13569 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.07□□□□□ -1.12
CFTRP13569 RN7SKP17-201ENST00000411242 351 ntBASIC8.07□□□□□ -1.12
CFTRP13569 RAB9AP4-201ENST00000415230 609 ntBASIC8.07□□□□□ -1.12
CFTRP13569 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC8.07□□□□□ -1.12
CFTRP13569 CR383656.1-201ENST00000484916 377 ntBASIC8.07□□□□□ -1.12
CFTRP13569 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC8.07□□□□□ -1.12
CFTRP13569 SNORA67.7-201ENST00000516664 135 ntBASIC8.07□□□□□ -1.12
CFTRP13569 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CFTRP13569 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
CFTRP13569 AC040958.1-201ENST00000561102 201 ntBASIC8.07□□□□□ -1.12
CFTRP13569 AC053481.3-201ENST00000577881 843 ntBASIC8.07□□□□□ -1.12
CFTRP13569 AP001160.4-201ENST00000596971 382 ntBASIC8.07□□□□□ -1.12
CFTRP13569 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC8.07□□□□□ -1.12
CFTRP13569 AC025031.4-201ENST00000621248 3271 ntBASIC8.07□□□□□ -1.12
CFTRP13569 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC8.07□□□□□ -1.12
CFTRP13569 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CFTRP13569 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CFTRP13569 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFTRP13569 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFTRP13569 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CFTRP13569 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFTRP13569 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC8.07□□□□□ -1.12
CFTRP13569 CARF-203ENST00000414439 2099 ntTSL 2 BASIC8.07□□□□□ -1.12
CFTRP13569 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFTRP13569 CYP1D1P-201ENST00000416662 1433 ntBASIC8.07□□□□□ -1.12
CFTRP13569 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFTRP13569 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFTRP13569 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC8.07□□□□□ -1.12
CFTRP13569 SNORA70.4-201ENST00000365509 134 ntBASIC8.06□□□□□ -1.12
CFTRP13569 OR1F12-201ENST00000402365 945 ntBASIC8.06□□□□□ -1.12
CFTRP13569 RPS27AP16-201ENST00000492222 470 ntBASIC8.06□□□□□ -1.12
CFTRP13569 AC016559.2-201ENST00000510759 359 ntBASIC8.06□□□□□ -1.12
CFTRP13569 AC136777.2-201ENST00000522979 358 ntBASIC8.06□□□□□ -1.12
CFTRP13569 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFTRP13569 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CFTRP13569 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CFTRP13569 PSMB7P1-201ENST00000556349 514 ntBASIC8.06□□□□□ -1.12
CFTRP13569 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.06□□□□□ -1.12
CFTRP13569 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC8.06□□□□□ -1.12
CFTRP13569 AC112200.1-201ENST00000625015 234 ntBASIC8.06□□□□□ -1.12
CFTRP13569 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CFTRP13569 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CFTRP13569 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC8.06□□□□□ -1.12
CFTRP13569 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.06□□□□□ -1.12
CFTRP13569 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC8.06□□□□□ -1.12
CFTRP13569 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFTRP13569 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC8.06□□□□□ -1.12
CFTRP13569 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CFTRP13569 AC017104.4-201ENST00000636283 1592 ntBASIC8.06□□□□□ -1.12
CFTRP13569 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFTRP13569 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CFTRP13569 AC135352.1-201ENST00000506173 1418 ntBASIC8.06□□□□□ -1.12
CFTRP13569 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFTRP13569 AC011933.1-201ENST00000413334 321 ntBASIC8.06□□□□□ -1.12
CFTRP13569 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CFTRP13569 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC8.06□□□□□ -1.12
CFTRP13569 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC8.06□□□□□ -1.12
CFTRP13569 AC116533.1-201ENST00000459748 321 ntBASIC8.06□□□□□ -1.12
CFTRP13569 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC8.06□□□□□ -1.12
CFTRP13569 NDUFB4P12-201ENST00000513465 390 ntBASIC8.06□□□□□ -1.12
CFTRP13569 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.06□□□□□ -1.12
CFTRP13569 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC8.06□□□□□ -1.12
CFTRP13569 MIR3653-201ENST00000625572 110 ntBASIC8.06□□□□□ -1.12
CFTRP13569 AC006453.5-201ENST00000636451 619 ntBASIC8.06□□□□□ -1.12
CFTRP13569 AP005432.1-201ENST00000580891 3485 ntBASIC8.06□□□□□ -1.12
CFTRP13569 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 ST7-212ENST00000422922 1887 ntTSL 5 BASIC8.05□□□□□ -1.12
CFTRP13569 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 RNU1-94P-201ENST00000362627 173 ntBASIC8.05□□□□□ -1.12
CFTRP13569 RNU1-130P-201ENST00000363930 160 ntBASIC8.05□□□□□ -1.12
CFTRP13569 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC8.05□□□□□ -1.12
CFTRP13569 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFTRP13569 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms