Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC023050.1-201ENST00000498198 304 ntBASIC7.09□□□□□ -1.27
BMP3P12645 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC7.09□□□□□ -1.27
BMP3P12645 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC7.09□□□□□ -1.27
BMP3P12645 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.09□□□□□ -1.27
BMP3P12645 RNU6-319P-201ENST00000516025 108 ntBASIC7.09□□□□□ -1.27
BMP3P12645 RNA5SP271-201ENST00000516700 88 ntBASIC7.09□□□□□ -1.27
BMP3P12645 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.09□□□□□ -1.27
BMP3P12645 AP005639.1-201ENST00000526939 192 ntBASIC7.09□□□□□ -1.27
BMP3P12645 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.09□□□□□ -1.27
BMP3P12645 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.09□□□□□ -1.27
BMP3P12645 UBE2NP1-201ENST00000545592 458 ntBASIC7.09□□□□□ -1.27
BMP3P12645 RNU4ATAC-201ENST00000580972 127 ntBASIC7.09□□□□□ -1.27
BMP3P12645 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.09□□□□□ -1.27
BMP3P12645 AC119501.1-201ENST00000603646 475 ntBASIC7.09□□□□□ -1.27
BMP3P12645 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BMP3P12645 MIR6809-201ENST00000612189 116 ntBASIC7.09□□□□□ -1.27
BMP3P12645 AC090517.2-201ENST00000614966 680 ntBASIC7.09□□□□□ -1.27
BMP3P12645 AC096861.1-201ENST00000616652 240 ntBASIC7.09□□□□□ -1.27
BMP3P12645 AC015660.5-201ENST00000623238 564 ntBASIC7.09□□□□□ -1.27
BMP3P12645 CCAT2-201ENST00000630920 1752 ntBASIC7.09□□□□□ -1.27
BMP3P12645 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BMP3P12645 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
BMP3P12645 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.09□□□□□ -1.27
BMP3P12645 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.09□□□□□ -1.27
BMP3P12645 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.09□□□□□ -1.27
BMP3P12645 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BMP3P12645 AL359091.1-201ENST00000449048 1734 ntBASIC7.09□□□□□ -1.27
BMP3P12645 AL391261.1-201ENST00000555712 1479 ntBASIC7.09□□□□□ -1.27
BMP3P12645 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BMP3P12645 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
BMP3P12645 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.09□□□□□ -1.27
BMP3P12645 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
BMP3P12645 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
BMP3P12645 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.08□□□□□ -1.28
BMP3P12645 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 AF287957.1-201ENST00000607368 1595 ntBASIC7.08□□□□□ -1.28
BMP3P12645 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.08□□□□□ -1.28
BMP3P12645 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 AC008957.3-201ENST00000624112 2242 ntBASIC7.08□□□□□ -1.28
BMP3P12645 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.08□□□□□ -1.28
BMP3P12645 AC009135.2-201ENST00000624136 1768 ntBASIC7.08□□□□□ -1.28
BMP3P12645 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
BMP3P12645 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BMP3P12645 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.08□□□□□ -1.28
BMP3P12645 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BMP3P12645 AL391994.1-201ENST00000254724 282 ntBASIC7.08□□□□□ -1.28
BMP3P12645 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
BMP3P12645 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC7.08□□□□□ -1.28
BMP3P12645 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
BMP3P12645 RNU6-116P-201ENST00000384042 109 ntBASIC7.08□□□□□ -1.28
BMP3P12645 Y_RNA.465-201ENST00000384293 102 ntBASIC7.08□□□□□ -1.28
BMP3P12645 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.08□□□□□ -1.28
BMP3P12645 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.08□□□□□ -1.28
BMP3P12645 USP9YP20-201ENST00000419224 558 ntBASIC7.08□□□□□ -1.28
BMP3P12645 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BMP3P12645 RPS15AP30-201ENST00000420976 390 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.08□□□□□ -1.28
BMP3P12645 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 ISCA1P1-201ENST00000426679 387 ntBASIC7.08□□□□□ -1.28
BMP3P12645 RPS4XP16-201ENST00000427198 791 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.08□□□□□ -1.28
BMP3P12645 USP12PX-201ENST00000432383 1057 ntBASIC7.08□□□□□ -1.28
BMP3P12645 B3GNT2P1-201ENST00000434960 952 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AL512593.1-201ENST00000444758 779 ntBASIC7.08□□□□□ -1.28
BMP3P12645 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
BMP3P12645 ACA64.1-201ENST00000459171 127 ntBASIC7.08□□□□□ -1.28
BMP3P12645 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 MTCO2P30-201ENST00000503662 364 ntBASIC7.08□□□□□ -1.28
BMP3P12645 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.08□□□□□ -1.28
BMP3P12645 AC025465.4-201ENST00000513422 638 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC7.08□□□□□ -1.28
BMP3P12645 SCARNA18.1-201ENST00000516330 83 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.08□□□□□ -1.28
BMP3P12645 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.08□□□□□ -1.28
BMP3P12645 AC106038.2-201ENST00000520706 568 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 RAB11AP2-201ENST00000545905 639 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.08□□□□□ -1.28
BMP3P12645 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.08□□□□□ -1.28
BMP3P12645 ROCK1P1-201ENST00000573767 549 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.08□□□□□ -1.28
BMP3P12645 AC067852.5-201ENST00000589299 310 ntBASIC7.08□□□□□ -1.28
BMP3P12645 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BMP3P12645 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 AC006539.2-201ENST00000601729 572 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AL391497.1-201ENST00000608671 547 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AC064836.2-201ENST00000609491 462 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 AC010133.1-201ENST00000615809 842 ntBASIC7.08□□□□□ -1.28
BMP3P12645 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
BMP3P12645 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
BMP3P12645 ZNF680P1-201ENST00000436625 1469 ntBASIC7.08□□□□□ -1.28
BMP3P12645 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BMP3P12645 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.08□□□□□ -1.28
BMP3P12645 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.08□□□□□ -1.28
BMP3P12645 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BMP3P12645 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BMP3P12645 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms