Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP2P08253 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 AC235565.1-201ENST00000456962 1325 ntBASIC5.3□□□□□ -1.56
MMP2P08253 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
MMP2P08253 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 MTCO1P11-201ENST00000429111 1528 ntBASIC5.3□□□□□ -1.56
MMP2P08253 HSPA8P19-201ENST00000505359 1517 ntBASIC5.3□□□□□ -1.56
MMP2P08253 RAD1P1-201ENST00000231383 813 ntBASIC5.3□□□□□ -1.56
MMP2P08253 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
MMP2P08253 SNORA51.1-201ENST00000363243 140 ntBASIC5.3□□□□□ -1.56
MMP2P08253 RNU4-7P-201ENST00000364758 141 ntBASIC5.3□□□□□ -1.56
MMP2P08253 RNA5SP90-201ENST00000364801 99 ntBASIC5.3□□□□□ -1.56
MMP2P08253 RN7SKP153-201ENST00000365026 316 ntBASIC5.3□□□□□ -1.56
MMP2P08253 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
MMP2P08253 MIR323B-201ENST00000385269 82 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP2P08253 OR51A6P-201ENST00000418680 1004 ntBASIC5.3□□□□□ -1.56
MMP2P08253 SLC35E1P1-201ENST00000419313 864 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP2P08253 AL512637.2-201ENST00000431287 1256 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AC090018.1-201ENST00000434369 367 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AL512661.1-201ENST00000434586 1253 ntBASIC5.3□□□□□ -1.56
MMP2P08253 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 RPS11P7-201ENST00000442125 465 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 HMGN1P5-201ENST00000448591 263 ntBASIC5.3□□□□□ -1.56
MMP2P08253 GAPDHP14-201ENST00000450472 937 ntBASIC5.3□□□□□ -1.56
MMP2P08253 ATP5G1P3-201ENST00000463301 410 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AC022133.1-201ENST00000490961 571 ntBASIC5.3□□□□□ -1.56
MMP2P08253 SUMO1P1-201ENST00000497904 306 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP2P08253 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 RPS4XP20-201ENST00000505751 772 ntBASIC5.3□□□□□ -1.56
MMP2P08253 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 AC098976.1-201ENST00000513014 541 ntBASIC5.3□□□□□ -1.56
MMP2P08253 EIF3KP3-201ENST00000514461 639 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AC112198.4-201ENST00000515450 351 ntBASIC5.3□□□□□ -1.56
MMP2P08253 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP2P08253 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP2P08253 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP2P08253 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 AC018552.1-201ENST00000562099 811 ntBASIC5.3□□□□□ -1.56
MMP2P08253 CD24P2-201ENST00000565486 219 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP2P08253 RN7SL708P-201ENST00000580952 299 ntBASIC5.3□□□□□ -1.56
MMP2P08253 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP2P08253 OR1AB1P-201ENST00000585564 761 ntBASIC5.3□□□□□ -1.56
MMP2P08253 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 AC090617.9-201ENST00000623751 147 ntBASIC5.3□□□□□ -1.56
MMP2P08253 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP2P08253 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
MMP2P08253 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP2P08253 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
MMP2P08253 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
MMP2P08253 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.3□□□□□ -1.56
MMP2P08253 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
MMP2P08253 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.3□□□□□ -1.56
MMP2P08253 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MMP2P08253 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
MMP2P08253 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP2P08253 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP2P08253 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP2P08253 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
MMP2P08253 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.29□□□□□ -1.56
MMP2P08253 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP2P08253 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
MMP2P08253 RNU6-171P-201ENST00000384354 107 ntBASIC5.29□□□□□ -1.56
MMP2P08253 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP2P08253 RPL12P9-201ENST00000412942 488 ntBASIC5.29□□□□□ -1.56
MMP2P08253 AC009506.2-201ENST00000420635 840 ntBASIC5.29□□□□□ -1.56
MMP2P08253 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP2P08253 AL136231.1-201ENST00000429407 730 ntBASIC5.29□□□□□ -1.56
MMP2P08253 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP2P08253 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP2P08253 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.29□□□□□ -1.56
MMP2P08253 AL353898.1-201ENST00000444055 238 ntBASIC5.29□□□□□ -1.56
MMP2P08253 Z92846.1-201ENST00000456203 268 ntBASIC5.29□□□□□ -1.56
MMP2P08253 AC092905.1-201ENST00000467527 949 ntBASIC5.29□□□□□ -1.56
MMP2P08253 RPS27AP18-201ENST00000515536 459 ntBASIC5.29□□□□□ -1.56
MMP2P08253 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.29□□□□□ -1.56
MMP2P08253 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MMP2P08253 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP2P08253 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP2P08253 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.29□□□□□ -1.56
MMP2P08253 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.29□□□□□ -1.56
MMP2P08253 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.29□□□□□ -1.56
MMP2P08253 AC007225.2-201ENST00000562529 256 ntBASIC5.29□□□□□ -1.56
MMP2P08253 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.29□□□□□ -1.56
MMP2P08253 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms