Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 SNORA58B-201ENST00000364259 136 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 RNU1-82P-201ENST00000390851 165 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 TRGV5P-201ENST00000419915 354 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 GLUD1P9-201ENST00000420997 1173 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AL590762.4-201ENST00000425885 253 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AC104837.2-201ENST00000427236 424 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AC004938.1-201ENST00000438468 308 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 RPS3AP53-201ENST00000454716 778 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AC069304.1-201ENST00000491593 704 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AP001880.2-201ENST00000538233 448 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 EDDM3DP-201ENST00000554692 434 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AP002884.5-201ENST00000595053 1132 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AC007342.5-201ENST00000571340 2142 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 AC132825.1-201ENST00000463573 2247 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 AL442639.1-201ENST00000625030 1899 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 AC025574.1-201ENST00000554784 1653 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 RN7SKP125-201ENST00000410481 302 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 RNA5SP113-201ENST00000410486 84 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 RSU1P3-201ENST00000412878 835 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 RPL7P57-201ENST00000423238 740 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 RPS26P4-201ENST00000431743 355 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 RPS5P7-201ENST00000456664 608 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 SCARNA22-201ENST00000503991 125 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 MIR3934-201ENST00000579806 107 ntBASIC4.84□□□□□ -1.63
HLA-DQB2P05538 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQB2P05538 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.84□□□□□ -1.64
HLA-DQB2P05538 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DQB2P05538 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HLA-DQB2P05538 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 DHX9P1-201ENST00000436565 3076 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 SALL4P2-201ENST00000423288 2910 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 AL445487.1-201ENST00000415694 1580 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 GAPDHP15-201ENST00000398586 975 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 AL592291.1-201ENST00000403830 352 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 OR51B3P-201ENST00000412287 913 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 RPL36AP10-201ENST00000421785 322 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 AC006455.6-201ENST00000426192 893 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 NPM1P22-201ENST00000427761 952 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 OR1H1P-201ENST00000448731 937 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 OTX2P1-201ENST00000450956 354 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 AC079168.2-201ENST00000453977 416 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 BRD9P1-201ENST00000529855 560 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 MIR3667-201ENST00000581025 74 ntBASIC4.83□□□□□ -1.64
HLA-DQB2P05538 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DQB2P05538 AL121950.1-201ENST00000624993 2077 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms