Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 E2F6P2-201ENST00000420708 748 ntBASIC2.89□□□□□ -1.95
APOBP04114 GAPDHP14-201ENST00000450472 937 ntBASIC2.89□□□□□ -1.95
APOBP04114 TAAR4P-201ENST00000454843 1039 ntBASIC2.89□□□□□ -1.95
APOBP04114 TRIM36-IT1-201ENST00000503723 881 ntBASIC2.89□□□□□ -1.95
APOBP04114 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC2.89□□□□□ -1.95
APOBP04114 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.89□□□□□ -1.95
APOBP04114 AL139124.1-201ENST00000609123 421 ntBASIC2.89□□□□□ -1.95
APOBP04114 FAM27D1-201ENST00000612308 341 ntBASIC2.89□□□□□ -1.95
APOBP04114 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.89□□□□□ -1.95
APOBP04114 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC2.88□□□□□ -1.95
APOBP04114 MIR2116-201ENST00000517221 80 ntBASIC2.88□□□□□ -1.95
APOBP04114 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 AP001804.1-201ENST00000526868 919 ntBASIC2.88□□□□□ -1.95
APOBP04114 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC2.88□□□□□ -1.95
APOBP04114 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 MIR7151-201ENST00000617477 60 ntBASIC2.88□□□□□ -1.95
APOBP04114 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
APOBP04114 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC2.88□□□□□ -1.95
APOBP04114 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC2.88□□□□□ -1.95
APOBP04114 HSFY1P1-201ENST00000423928 1178 ntBASIC2.88□□□□□ -1.95
APOBP04114 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 OR2L1P-202ENST00000641567 1023 ntBASIC2.88□□□□□ -1.95
APOBP04114 AC073342.2-201ENST00000595842 1800 ntBASIC2.88□□□□□ -1.95
APOBP04114 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 WAC-209ENST00000428935 1320 ntTSL 2 BASIC2.88□□□□□ -1.95
APOBP04114 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 DMD-222ENST00000474231 5209 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC2.88□□□□□ -1.95
APOBP04114 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
APOBP04114 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
APOBP04114 SNRPFP1-201ENST00000414761 252 ntBASIC2.88□□□□□ -1.95
APOBP04114 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.88□□□□□ -1.95
APOBP04114 snoU13.29-201ENST00000459370 104 ntBASIC2.88□□□□□ -1.95
APOBP04114 AC012409.3-201ENST00000611343 981 ntBASIC2.88□□□□□ -1.95
APOBP04114 AL121772.2-201ENST00000614331 297 ntBASIC2.88□□□□□ -1.95
APOBP04114 AC091953.5-201ENST00000622919 233 ntBASIC2.88□□□□□ -1.95
APOBP04114 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
APOBP04114 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
APOBP04114 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
APOBP04114 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
APOBP04114 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.88□□□□□ -1.95
APOBP04114 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.88□□□□□ -1.95
APOBP04114 NANOGP10-201ENST00000453325 895 ntBASIC2.88□□□□□ -1.95
APOBP04114 RN7SL517P-201ENST00000462240 305 ntBASIC2.88□□□□□ -1.95
APOBP04114 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC2.88□□□□□ -1.95
APOBP04114 RNU1-6P-201ENST00000516290 144 ntBASIC2.88□□□□□ -1.95
APOBP04114 HNRNPCP4-201ENST00000571636 900 ntBASIC2.88□□□□□ -1.95
APOBP04114 AL356863.1-201ENST00000623378 1080 ntBASIC2.88□□□□□ -1.95
APOBP04114 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC2.88□□□□□ -1.95
APOBP04114 AC004076.2-201ENST00000620532 3323 ntBASIC2.88□□□□□ -1.95
APOBP04114 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 AL158827.1-201ENST00000416300 391 ntBASIC2.87□□□□□ -1.95
APOBP04114 NPM1P34-201ENST00000428821 893 ntBASIC2.87□□□□□ -1.95
APOBP04114 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.87□□□□□ -1.95
APOBP04114 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC2.87□□□□□ -1.95
APOBP04114 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC2.87□□□□□ -1.95
APOBP04114 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.87□□□□□ -1.95
APOBP04114 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.87□□□□□ -1.95
APOBP04114 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.87□□□□□ -1.95
APOBP04114 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC2.87□□□□□ -1.95
APOBP04114 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
APOBP04114 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
APOBP04114 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms