Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 AL022322.2-201ENST00000624072 20397 ntBASIC5.18□□□□□ -1.58
LDLRP01130 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRP01130 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LDLRP01130 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 RNA5SP183-201ENST00000362452 119 ntBASIC5.17□□□□□ -1.58
LDLRP01130 RNA5SP319-201ENST00000362768 119 ntBASIC5.17□□□□□ -1.58
LDLRP01130 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LDLRP01130 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 MIR765-201ENST00000390226 114 ntBASIC5.17□□□□□ -1.58
LDLRP01130 CTSL3P-202ENST00000412179 788 ntBASIC5.17□□□□□ -1.58
LDLRP01130 RPS6P23-201ENST00000413224 722 ntBASIC5.17□□□□□ -1.58
LDLRP01130 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 RPSAP35-201ENST00000413753 818 ntBASIC5.17□□□□□ -1.58
LDLRP01130 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.17□□□□□ -1.58
LDLRP01130 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LDLRP01130 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.17□□□□□ -1.58
LDLRP01130 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.17□□□□□ -1.58
LDLRP01130 AC023141.6-201ENST00000429418 337 ntBASIC5.17□□□□□ -1.58
LDLRP01130 RPL12P18-201ENST00000437175 325 ntBASIC5.17□□□□□ -1.58
LDLRP01130 AL157884.3-201ENST00000448273 1184 ntBASIC5.17□□□□□ -1.58
LDLRP01130 CCRL1P1-201ENST00000449542 1053 ntBASIC5.17□□□□□ -1.58
LDLRP01130 RPL7P61-201ENST00000451721 751 ntBASIC5.17□□□□□ -1.58
LDLRP01130 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.17□□□□□ -1.58
LDLRP01130 RPS21P4-201ENST00000487122 248 ntBASIC5.17□□□□□ -1.58
LDLRP01130 AC073610.1-201ENST00000489971 396 ntBASIC5.17□□□□□ -1.58
LDLRP01130 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 AC112206.4-201ENST00000515142 405 ntBASIC5.17□□□□□ -1.58
LDLRP01130 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.17□□□□□ -1.58
LDLRP01130 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.17□□□□□ -1.58
LDLRP01130 AC027369.5-201ENST00000533838 755 ntBASIC5.17□□□□□ -1.58
LDLRP01130 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.17□□□□□ -1.58
LDLRP01130 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 RBM22P12-201ENST00000567098 1255 ntBASIC5.17□□□□□ -1.58
LDLRP01130 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 AC098483.2-201ENST00000603158 454 ntBASIC5.17□□□□□ -1.58
LDLRP01130 AL671309.1-201ENST00000603750 544 ntBASIC5.17□□□□□ -1.58
LDLRP01130 AC012557.1-201ENST00000607115 611 ntBASIC5.17□□□□□ -1.58
LDLRP01130 AC253576.2-201ENST00000618815 580 ntBASIC5.17□□□□□ -1.58
LDLRP01130 MIR6810-201ENST00000622701 70 ntBASIC5.17□□□□□ -1.58
LDLRP01130 AP006248.3-201ENST00000623580 594 ntBASIC5.17□□□□□ -1.58
LDLRP01130 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.17□□□□□ -1.58
LDLRP01130 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 AC003973.3-201ENST00000624863 2822 ntBASIC5.17□□□□□ -1.58
LDLRP01130 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LDLRP01130 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LDLRP01130 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LDLRP01130 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.16□□□□□ -1.58
LDLRP01130 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 THAP12P5-201ENST00000405864 2275 ntBASIC5.16□□□□□ -1.58
LDLRP01130 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.16□□□□□ -1.58
LDLRP01130 U8.4-201ENST00000363626 134 ntBASIC5.16□□□□□ -1.58
LDLRP01130 RNA5SP234-201ENST00000363916 119 ntBASIC5.16□□□□□ -1.58
LDLRP01130 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.16□□□□□ -1.58
LDLRP01130 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LDLRP01130 AL009179.1-201ENST00000406085 265 ntBASIC5.16□□□□□ -1.58
LDLRP01130 AC211486.3-201ENST00000412694 621 ntBASIC5.16□□□□□ -1.58
LDLRP01130 RPL12P9-201ENST00000412942 488 ntBASIC5.16□□□□□ -1.58
LDLRP01130 PCNPP4-201ENST00000414817 517 ntBASIC5.16□□□□□ -1.58
LDLRP01130 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.16□□□□□ -1.58
LDLRP01130 RPL7L1P9-201ENST00000431298 745 ntBASIC5.16□□□□□ -1.58
LDLRP01130 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.16□□□□□ -1.58
LDLRP01130 CYCSP12-201ENST00000437729 300 ntBASIC5.16□□□□□ -1.58
LDLRP01130 CEACAMP7-201ENST00000444105 496 ntBASIC5.16□□□□□ -1.58
LDLRP01130 LDHBP2-201ENST00000456969 1005 ntBASIC5.16□□□□□ -1.58
LDLRP01130 AC018635.1-201ENST00000468292 1030 ntBASIC5.16□□□□□ -1.58
LDLRP01130 RN7SL222P-201ENST00000476452 299 ntBASIC5.16□□□□□ -1.58
LDLRP01130 RN7SL97P-201ENST00000486780 299 ntBASIC5.16□□□□□ -1.58
LDLRP01130 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.16□□□□□ -1.58
LDLRP01130 IMPA1P1-201ENST00000510718 842 ntBASIC5.16□□□□□ -1.58
LDLRP01130 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.16□□□□□ -1.58
LDLRP01130 SCARNA6.1-201ENST00000516989 238 ntBASIC5.16□□□□□ -1.58
LDLRP01130 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.16□□□□□ -1.58
LDLRP01130 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.16□□□□□ -1.58
LDLRP01130 OR8A2P-201ENST00000528631 952 ntBASIC5.16□□□□□ -1.58
LDLRP01130 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.16□□□□□ -1.58
LDLRP01130 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.16□□□□□ -1.58
LDLRP01130 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LDLRP01130 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.16□□□□□ -1.58
LDLRP01130 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.16□□□□□ -1.58
LDLRP01130 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.16□□□□□ -1.58
LDLRP01130 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms