Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.78□□□□□ -1.48
CNOT4O95628 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNOT4O95628 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNOT4O95628 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.78□□□□□ -1.48
CNOT4O95628 RNU6-694P-201ENST00000364071 147 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 RNU6-185P-201ENST00000384421 107 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 RNU1-46P-201ENST00000384425 164 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 RPS27AP11-201ENST00000402798 447 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 RPL12P23-201ENST00000405880 490 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 RNU6-757P-201ENST00000410334 100 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.78□□□□□ -1.48
CNOT4O95628 AK4P4-201ENST00000419465 646 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNOT4O95628 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.78□□□□□ -1.48
CNOT4O95628 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 AC242426.1-201ENST00000435270 960 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.78□□□□□ -1.48
CNOT4O95628 RPL7P48-201ENST00000461513 746 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNOT4O95628 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.78□□□□□ -1.48
CNOT4O95628 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.78□□□□□ -1.48
CNOT4O95628 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CNOT4O95628 CBX3P3-201ENST00000508108 532 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.78□□□□□ -1.48
CNOT4O95628 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 IGHV3-57-201ENST00000520143 280 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.78□□□□□ -1.48
CNOT4O95628 UBE2NP1-201ENST00000545592 458 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.78□□□□□ -1.48
CNOT4O95628 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.78□□□□□ -1.48
CNOT4O95628 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNOT4O95628 AL109618.2-201ENST00000605527 211 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 SNORD96A-201ENST00000606577 79 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 AC116651.1-201ENST00000609724 556 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 AL139418.1-201ENST00000613613 177 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNOT4O95628 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 AC008443.7-201ENST00000622195 246 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 AC007342.8-201ENST00000623278 678 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.78□□□□□ -1.48
CNOT4O95628 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.78□□□□□ -1.48
CNOT4O95628 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
CNOT4O95628 AC112243.1-201ENST00000623949 3851 ntBASIC5.78□□□□□ -1.48
CNOT4O95628 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNOT4O95628 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CNOT4O95628 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.77□□□□□ -1.49
CNOT4O95628 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.77□□□□□ -1.49
CNOT4O95628 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 AC004520.1-201ENST00000608362 1413 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
CNOT4O95628 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.77□□□□□ -1.49
CNOT4O95628 Y_RNA.192-201ENST00000363977 102 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 RNY3P14-201ENST00000384309 102 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 U3.28-201ENST00000391249 210 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 VDAC2P1-201ENST00000399358 958 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 PSMA6P1-201ENST00000400275 741 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 AC023128.2-201ENST00000420880 1223 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.77□□□□□ -1.49
CNOT4O95628 PSMD10P2-201ENST00000432890 672 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 EMC3-AS1-205ENST00000438698 534 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.77□□□□□ -1.49
CNOT4O95628 RBMX2P4-201ENST00000441256 376 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 GTF3AP5-201ENST00000442645 697 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.77□□□□□ -1.49
CNOT4O95628 AL591363.1-201ENST00000450091 483 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 RPL10P17-201ENST00000453852 316 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.77□□□□□ -1.49
CNOT4O95628 FTH1P8-201ENST00000498161 514 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CNOT4O95628 AC112484.3-201ENST00000505910 329 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.77□□□□□ -1.49
CNOT4O95628 AC079140.3-201ENST00000511111 550 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 SNORA74.1-201ENST00000516320 180 ntBASIC5.77□□□□□ -1.49
CNOT4O95628 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.77□□□□□ -1.49
CNOT4O95628 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.77□□□□□ -1.49
CNOT4O95628 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms