Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
NKX2-2O95096 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 MIR133B-201ENST00000362210 119 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-2O95096 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-2O95096 SNORA48.4-201ENST00000391089 134 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 HMGB3P31-201ENST00000413333 595 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-2O95096 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.99□□□□□ -1.61
NKX2-2O95096 NAP1L4P2-201ENST00000425958 899 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-2O95096 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 AC090804.1-201ENST00000448870 490 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX2-2O95096 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 RPL35AP19-201ENST00000469425 329 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 AC100832.1-201ENST00000471945 383 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-2O95096 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-2O95096 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX2-2O95096 BLZF2P-201ENST00000553776 1130 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-2O95096 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-2O95096 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-2O95096 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-2O95096 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-2O95096 AC090330.1-201ENST00000588646 764 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-2O95096 BNIP3P40-201ENST00000596017 556 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 AC026790.2-201ENST00000606282 430 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-2O95096 AC026124.2-201ENST00000621847 656 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 MIR8080-201ENST00000622224 89 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 AL445984.1-201ENST00000637834 659 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 AC132825.7-201ENST00000638744 335 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 SAMMSON-209ENST00000641222 1100 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX2-2O95096 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-2O95096 CASC19-248ENST00000641674 1356 ntBASIC4.99□□□□□ -1.61
NKX2-2O95096 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX2-2O95096 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-2O95096 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
NKX2-2O95096 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-2O95096 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX2-2O95096 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NKX2-2O95096 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
NKX2-2O95096 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NKX2-2O95096 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.98□□□□□ -1.61
NKX2-2O95096 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-2O95096 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
NKX2-2O95096 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NKX2-2O95096 RNU1-19P-201ENST00000363306 165 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 RNA5SP335-201ENST00000363817 110 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 AC234772.1-201ENST00000377927 937 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 RNA5SP241-201ENST00000391326 114 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 AL133388.1-201ENST00000404509 287 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 AP000357.1-201ENST00000409926 1165 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 UBE2V1P9-201ENST00000414760 368 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AC009506.2-201ENST00000420635 840 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-2O95096 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AC093422.3-201ENST00000428506 305 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 HSPD1P12-201ENST00000429127 1069 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 RPS7P2-201ENST00000435134 607 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-2O95096 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.98□□□□□ -1.61
NKX2-2O95096 CYCSP51-201ENST00000443545 318 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AC023141.9-201ENST00000458734 412 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 RNU7-27P-201ENST00000459281 62 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 RPL7P48-201ENST00000461513 746 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 RN7SL717P-201ENST00000478343 297 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AC093815.1-201ENST00000508637 280 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-2O95096 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AC022360.1-201ENST00000521058 340 ntBASIC4.98□□□□□ -1.61
NKX2-2O95096 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-2O95096 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX2-2O95096 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-2O95096 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NKX2-2O95096 MIR548Y-201ENST00000582739 110 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms