Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ECM1P2-201ENST00000503354 1577 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 NXF4-202ENST00000416098 1465 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 Z98755.1-201ENST00000407015 1384 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 MTCO1P22-201ENST00000604619 1360 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 SNORA2.3-201ENST00000383920 135 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 RPS3P2-201ENST00000421346 701 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 IPPKP1-201ENST00000422501 768 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 RGS17P1-201ENST00000423358 553 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC093414.1-201ENST00000434712 514 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 Z84478.1-201ENST00000438230 1219 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC073052.1-201ENST00000440417 714 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 TXNP5-201ENST00000441043 315 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AL035551.1-201ENST00000446931 348 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC022431.1-201ENST00000450941 438 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC037198.2-201ENST00000478845 733 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC113430.1-201ENST00000506872 718 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 RNA5SP438-201ENST00000516561 112 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 RNA5SP271-201ENST00000516700 88 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 MYL12AP1-201ENST00000518490 515 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 TRIM77BP-201ENST00000524985 1119 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC087477.6-201ENST00000559595 843 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC092121.1-201ENST00000569452 202 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC133552.5-201ENST00000604266 540 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 COX6CP4-201ENST00000605798 228 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AC023813.4-201ENST00000607580 580 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 AL669942.2-201ENST00000620352 697 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 PANDAR-201ENST00000629595 1506 ntBASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RBFOX3A6NFN3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 SRRM1P3-201ENST00000426911 2678 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 MIR448-201ENST00000362131 111 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 RNA5SP273-201ENST00000362484 113 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 RNA5SP90-201ENST00000364801 99 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 SDHDP6-201ENST00000414693 480 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC066692.1-201ENST00000421721 457 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC005033.1-201ENST00000428904 813 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC079807.1-201ENST00000429993 481 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC092162.1-201ENST00000432828 434 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC004938.1-201ENST00000438468 308 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC069285.2-201ENST00000440210 275 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 TDGF1P1-201ENST00000445734 527 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC104634.1-201ENST00000452720 462 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 HLA-DPA3-207ENST00000454398 229 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 MTCYBP14-201ENST00000457471 715 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 RPS23P6-201ENST00000466136 431 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 RN7SL809P-201ENST00000482040 297 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC006499.4-201ENST00000510947 694 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AC114781.3-201ENST00000512083 142 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 RNU4-18P-201ENST00000516751 149 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 snoU109.6-201ENST00000516831 118 ntBASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC3.92□□□□□ -1.78
RBFOX3A6NFN3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms