Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 ISCA1P6-201ENST00000427740 390 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 RPL7L1P11-201ENST00000446092 721 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 RPL36AP41-201ENST00000493820 306 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 MIR449C-201ENST00000516047 92 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 AC019206.1-201ENST00000621938 425 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 AC022164.1-201ENST00000568767 2673 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 SNORA2.3-201ENST00000383920 135 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 USP9YP36-201ENST00000424581 829 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 USP9YP31-201ENST00000431405 881 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 AL159987.2-201ENST00000432754 307 ntBASIC1.94□□□□□ -2.1
MACF1Q9UPN3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
MACF1Q9UPN3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RNU2-65P-201ENST00000410162 185 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC053481.4-201ENST00000583164 216 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC022726.1-201ENST00000587475 207 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 SACS-202ENST00000402364 15134 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 SNORA48.5-201ENST00000391143 135 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RPL7P44-201ENST00000424827 742 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 NPM1P51-201ENST00000443470 744 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RPL7P23-201ENST00000493874 747 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 OR8F1P-201ENST00000425243 930 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC1.93□□□□□ -2.1
MACF1Q9UPN3 RPL21P17-201ENST00000397467 475 ntBASIC1.93□□□□□ -2.1
MACF1Q9UPN3 AL590806.1-201ENST00000415818 853 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms