Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RN7SL319P-201ENST00000480656 221 ntBASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 RN7SL441P-201ENST00000492388 296 ntBASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 RPSAP51-201ENST00000497462 645 ntBASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 AC098976.1-201ENST00000513014 541 ntBASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 HNRNPRP2-201ENST00000528421 743 ntBASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 AL512310.9-201ENST00000553311 948 ntBASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 AC108359.1-201ENST00000616451 1211 ntBASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 IRF5P1-201ENST00000504852 2164 ntBASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.48□□□□□ -1.69
CLCF1Q9UBD9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 DDX18P6-201ENST00000450119 1997 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AL356968.2-201ENST00000412769 1257 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AL360081.1-201ENST00000428299 555 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC093414.1-201ENST00000434712 514 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC112498.1-201ENST00000444401 332 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 OR7L1P-201ENST00000456181 380 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 MTCYBP14-201ENST00000457471 715 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC105233.1-201ENST00000498840 781 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC091917.2-201ENST00000505002 744 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 MRPS33P2-201ENST00000507850 322 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC016559.2-201ENST00000510759 359 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC012339.2-201ENST00000523996 453 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 GCSHP4-201ENST00000538792 439 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AL359219.2-201ENST00000555184 348 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 AC073342.3-201ENST00000624211 193 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 SMG1P7-201ENST00000565246 2704 ntBASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCF1Q9UBD9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLCF1Q9UBD9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CLCF1Q9UBD9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLCF1Q9UBD9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CLCF1Q9UBD9 AL022322.2-201ENST00000624072 20397 ntBASIC4.46□□□□□ -1.69
CLCF1Q9UBD9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.46□□□□□ -1.69
CLCF1Q9UBD9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AL035419.1-201ENST00000397037 564 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AL136116.2-201ENST00000404020 785 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AL035079.1-201ENST00000405210 287 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AF186996.5-201ENST00000418098 904 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AL161722.1-201ENST00000446972 1032 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AC004980.3-201ENST00000447046 365 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 SUMO2P4-201ENST00000504193 276 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 GAPDHP56-201ENST00000506031 988 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 CDH12P4-201ENST00000517835 295 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 CDH12P3-201ENST00000517935 295 ntBASIC4.46□□□□□ -1.7
CLCF1Q9UBD9 CDH12P1-201ENST00000518435 295 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms