Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL442639.1-201ENST00000625030 1899 ntBASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 AC023632.6-201ENST00000624338 2177 ntBASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 AF186996.5-201ENST00000418098 904 ntBASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 RN7SL346P-201ENST00000491561 294 ntBASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 OR8G5-201ENST00000524943 1041 ntBASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 AC125257.1-201ENST00000560400 2930 ntBASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 NCLP2-201ENST00000416078 1462 ntBASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AL357515.1-201ENST00000402967 542 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 CTSL3P-202ENST00000412179 788 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC016397.1-201ENST00000412463 242 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 TBCAP2-201ENST00000416175 326 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 FABP7P1-201ENST00000424004 391 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC007559.1-201ENST00000428736 355 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC093166.2-201ENST00000455969 1017 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 RPL12P20-201ENST00000475538 479 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC020890.1-201ENST00000491837 504 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 RN7SKP276-201ENST00000516242 268 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AL512782.1-201ENST00000603093 364 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AL133338.2-201ENST00000604292 736 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC243960.7-201ENST00000623532 707 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AL356390.1-201ENST00000455684 397 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC023424.1-201ENST00000496058 459 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 OR5M2P-201ENST00000529003 936 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 RN7SL802P-201ENST00000577858 299 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 MIR4472-2-201ENST00000582069 67 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC068790.4-201ENST00000602474 263 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 AC005261.2-201ENST00000593427 4258 ntBASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
KIAA1549Q9HCM3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 FAM3C2-201ENST00000312214 681 ntBASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AC079741.1-201ENST00000321498 212 ntBASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 E2F6P2-201ENST00000420708 748 ntBASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AURKAPS2-201ENST00000454983 333 ntBASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.35□□□□□ -1.71
KIAA1549Q9HCM3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms