Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC010240.2-201ENST00000445363 1205 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC023271.1-201ENST00000445936 1090 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AL358876.1-201ENST00000453364 1075 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 VPS25P1-201ENST00000455691 508 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 TPT1P7-201ENST00000458300 517 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC005165.2-201ENST00000466070 380 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 MTCO3P38-201ENST00000468910 766 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 CCDC75P1-201ENST00000469247 791 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 RPL7P18-201ENST00000478965 734 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC106822.1-201ENST00000502647 526 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC025459.1-201ENST00000504072 156 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 RPS3AP4-201ENST00000555161 764 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 ZNF519P3-201ENST00000557158 1032 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 TPRX1P1-201ENST00000557620 319 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 MTCO1P40-201ENST00000574371 625 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC012417.1-201ENST00000582307 1039 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 RN7SL475P-201ENST00000583379 298 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AP001542.2-201ENST00000593141 364 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AL356055.1-201ENST00000602528 446 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC009237.13-201ENST00000603193 276 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC091805.2-201ENST00000603848 235 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AL589743.6-201ENST00000611025 117 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 uc_338.29-201ENST00000615099 168 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 CASC19-264ENST00000641912 1184 ntBASIC5.65□□□□□ -1.5
SEC61A2Q9H9S3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 SAMM50P1-201ENST00000455403 1399 ntBASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SEC61A2Q9H9S3 AC074141.1-201ENST00000588129 2995 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 RNU6-560P-201ENST00000364007 108 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 TAF9BP1-201ENST00000396646 746 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 HMGB3P31-201ENST00000413333 595 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AL139184.1-202ENST00000422303 222 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 RPSAP32-201ENST00000432681 526 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC104849.1-201ENST00000462623 405 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 OR9A1P-202ENST00000484361 945 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC093816.1-201ENST00000515076 913 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 HNRNPKP5-201ENST00000515300 253 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 IGKV2-19-201ENST00000518132 283 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 COX6B1P4-201ENST00000519826 484 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AP003033.2-201ENST00000528901 805 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AP004247.1-201ENST00000531556 1289 ntBASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.64□□□□□ -1.51
SEC61A2Q9H9S3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms