Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC008993.2-201ENST00000631744 806 ntBASIC5.21□□□□□ -1.58
PKP4Q99569 MIR4302-201ENST00000638058 60 ntBASIC5.21□□□□□ -1.58
PKP4Q99569 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.21□□□□□ -1.58
PKP4Q99569 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
PKP4Q99569 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.21□□□□□ -1.58
PKP4Q99569 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PKP4Q99569 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKP4Q99569 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PKP4Q99569 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.21□□□□□ -1.58
PKP4Q99569 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.21□□□□□ -1.58
PKP4Q99569 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PKP4Q99569 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 SNORA5.1-201ENST00000384275 131 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 HSPA8P15-201ENST00000401676 786 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 GPS2P1-201ENST00000411761 986 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 BTF3P9-201ENST00000418784 283 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.2□□□□□ -1.58
PKP4Q99569 NPM1P22-201ENST00000427761 952 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 MTND4LP14-201ENST00000429447 288 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 AC022022.1-201ENST00000430304 178 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 RPS26P41-201ENST00000450370 284 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 AC098826.2-201ENST00000452011 651 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 MTND2P30-201ENST00000456663 382 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 ATP5G1P3-201ENST00000463301 410 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 SIAH1P1-201ENST00000479411 923 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 RN7SL423P-201ENST00000486202 304 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 RN7SL447P-201ENST00000494711 245 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 CDC42P3-201ENST00000518493 633 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.2□□□□□ -1.58
PKP4Q99569 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.2□□□□□ -1.58
PKP4Q99569 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 YWHABP2-201ENST00000540201 713 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.2□□□□□ -1.58
PKP4Q99569 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 AC126177.5-201ENST00000549599 178 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.2□□□□□ -1.58
PKP4Q99569 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.2□□□□□ -1.58
PKP4Q99569 AP004372.1-201ENST00000604842 844 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 AC019080.5-201ENST00000624891 757 ntBASIC5.2□□□□□ -1.58
PKP4Q99569 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.2□□□□□ -1.58
PKP4Q99569 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.2□□□□□ -1.58
PKP4Q99569 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.2□□□□□ -1.58
PKP4Q99569 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKP4Q99569 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PKP4Q99569 AC079298.1-201ENST00000625026 1619 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
PKP4Q99569 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PKP4Q99569 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PKP4Q99569 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.19□□□□□ -1.58
PKP4Q99569 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.19□□□□□ -1.58
PKP4Q99569 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PKP4Q99569 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PKP4Q99569 RN7SKP160-201ENST00000363804 340 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.19□□□□□ -1.58
PKP4Q99569 GCNT6-201ENST00000379591 934 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 RNA5SP339-201ENST00000390987 122 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.19□□□□□ -1.58
PKP4Q99569 RNA5SP487-201ENST00000410186 122 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 RN7SKP59-201ENST00000410520 314 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PKP4Q99569 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.19□□□□□ -1.58
PKP4Q99569 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.19□□□□□ -1.58
PKP4Q99569 AC023141.6-201ENST00000429418 337 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 RPL7AP49-201ENST00000429522 581 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.19□□□□□ -1.58
PKP4Q99569 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.19□□□□□ -1.58
PKP4Q99569 AL591438.1-201ENST00000433508 581 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.19□□□□□ -1.58
PKP4Q99569 SPRYD7P1-201ENST00000443861 570 ntBASIC5.19□□□□□ -1.58
PKP4Q99569 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms