Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SIN3AQ96ST3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC114755.2-201ENST00000413520 361 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AL451139.1-201ENST00000434718 346 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC079168.2-201ENST00000453977 416 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 EIF4A2P5-201ENST00000529914 499 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC010503.3-201ENST00000594355 540 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC100827.5-201ENST00000615883 426 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC012414.7-202ENST00000622705 1090 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AL442639.1-201ENST00000625030 1899 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 AC003985.2-201ENST00000562268 1669 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SIN3AQ96ST3 SALL4P2-201ENST00000423288 2910 ntBASIC6.93□□□□□ -1.3
SIN3AQ96ST3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 GLUD1P9-201ENST00000420997 1173 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 AC097523.2-201ENST00000435551 652 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 TDGF1P1-201ENST00000445734 527 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 AC108463.1-201ENST00000450258 347 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 Y_RNA.719-201ENST00000517156 106 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 AC005084.1-201ENST00000605160 304 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 MIR6853-201ENST00000619642 74 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 MIR6730-201ENST00000622213 67 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 AP003072.5-201ENST00000623872 773 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 DDX18P5-201ENST00000534547 1306 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 AL672167.1-203ENST00000641299 2975 ntBASIC6.92□□□□□ -1.3
SIN3AQ96ST3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SIN3AQ96ST3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 AL121839.2-201ENST00000565058 6943 ntBASIC6.91□□□□□ -1.3
SIN3AQ96ST3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 RNVU1-6-201ENST00000364688 164 ntBASIC6.91□□□□□ -1.3
SIN3AQ96ST3 U3.35-201ENST00000408405 208 ntBASIC6.91□□□□□ -1.3
SIN3AQ96ST3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 OR1H1P-201ENST00000448731 937 ntBASIC6.91□□□□□ -1.3
SIN3AQ96ST3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 RNU2-30P-201ENST00000516209 141 ntBASIC6.91□□□□□ -1.3
SIN3AQ96ST3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 AP000619.2-201ENST00000546014 969 ntBASIC6.91□□□□□ -1.3
SIN3AQ96ST3 AC084033.1-201ENST00000550830 633 ntBASIC6.91□□□□□ -1.3
SIN3AQ96ST3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 AC090953.1-201ENST00000604305 1092 ntBASIC6.91□□□□□ -1.3
SIN3AQ96ST3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SIN3AQ96ST3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 AL590240.1-201ENST00000334118 313 ntBASIC6.9□□□□□ -1.3
SIN3AQ96ST3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 RNU6-167P-201ENST00000384292 106 ntBASIC6.9□□□□□ -1.3
SIN3AQ96ST3 AL590762.2-201ENST00000395798 571 ntBASIC6.9□□□□□ -1.3
SIN3AQ96ST3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.9□□□□□ -1.3
SIN3AQ96ST3 OR2AH1P-201ENST00000425717 928 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms