Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 U3.53-201ENST00000628922 216 ntBASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 AC073136.1-201ENST00000449426 2884 ntBASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 RPS3AP23-201ENST00000401762 784 ntBASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 AL356967.1-201ENST00000406305 431 ntBASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 RNU4-25P-201ENST00000410569 230 ntBASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 RPL23AP1-201ENST00000428990 471 ntBASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 AC091868.1-201ENST00000508746 304 ntBASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 AC011944.2-201ENST00000624440 683 ntBASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP2Q96SN8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 MIR659-201ENST00000384963 97 ntBASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 NPM1P37-201ENST00000403105 874 ntBASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 E2F6P2-201ENST00000420708 748 ntBASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 AL049874.2-201ENST00000492636 288 ntBASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 ATP5J2P6-201ENST00000565203 266 ntBASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 AC015912.2-201ENST00000571053 181 ntBASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP2Q96SN8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 RPL36AP41-201ENST00000493820 306 ntBASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AP001781.1-201ENST00000530977 207 ntBASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AC006349.1-201ENST00000555526 235 ntBASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AC083809.1-201ENST00000615051 472 ntBASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AL592182.3-201ENST00000642132 3304 ntBASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 COX6CP17-201ENST00000421389 185 ntBASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AL451139.1-201ENST00000434718 346 ntBASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 RN7SL481P-201ENST00000477764 299 ntBASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 HPRT1P1-201ENST00000509498 657 ntBASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK5RAP2Q96SN8 AC114781.5-201ENST00000615297 108 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms