Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL606834.3-201ENST00000602615 496 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 RMST_10.1-201ENST00000616309 154 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AL122125.1-201ENST00000616999 600 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC127024.6-201ENST00000621598 424 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC019072.1-201ENST00000604535 1551 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC112198.2-201ENST00000426589 6996 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 RNU5E-10P-201ENST00000363506 118 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 RNU6-207P-201ENST00000384137 107 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 RNU6-298P-201ENST00000390888 96 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AL590806.1-201ENST00000415818 853 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AL133482.1-201ENST00000415988 498 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 BMS1P17-202ENST00000416720 316 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 RPA2P2-201ENST00000419698 796 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC007161.1-204ENST00000423039 460 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AKR1B10P1-201ENST00000425765 942 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC079807.1-201ENST00000429993 481 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 OR6D1P-201ENST00000436165 939 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AL161636.2-201ENST00000445179 927 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC098826.2-201ENST00000452011 651 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AZGP1P2-201ENST00000454506 345 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 RPL12P24-201ENST00000474907 486 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC037198.2-201ENST00000478845 733 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC114322.1-201ENST00000506771 926 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 NRBF2P4-201ENST00000520874 850 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC010735.1-201ENST00000567305 1026 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC106734.1-201ENST00000568646 663 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC012616.1-201ENST00000600294 197 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AL139124.1-201ENST00000609123 421 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 VN1R9P-201ENST00000614184 867 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 AC021106.3-201ENST00000623925 531 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 LINC01963-201ENST00000562038 3148 ntBASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDK5RAP3Q96JB5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AL121950.1-201ENST00000624993 2077 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC007342.7-201ENST00000624610 2337 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 RNU5B-4P-201ENST00000363508 111 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AL031985.1-201ENST00000392713 418 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 RN7SKP286-201ENST00000410894 299 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 UBE2V1P9-201ENST00000414760 368 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms