Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC010285.3-201ENST00000511668 676 ntBASIC4.9□□□□□ -1.63
PTP4A1Q93096 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTP4A1Q93096 AC027369.5-201ENST00000533838 755 ntBASIC4.9□□□□□ -1.63
PTP4A1Q93096 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTP4A1Q93096 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTP4A1Q93096 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTP4A1Q93096 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 AL390318.1-201ENST00000624564 687 ntBASIC4.9□□□□□ -1.63
PTP4A1Q93096 AC087565.3-203ENST00000641018 837 ntBASIC4.9□□□□□ -1.63
PTP4A1Q93096 ZNF90P1-201ENST00000480493 1951 ntBASIC4.9□□□□□ -1.63
PTP4A1Q93096 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTP4A1Q93096 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTP4A1Q93096 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTP4A1Q93096 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTP4A1Q93096 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PTP4A1Q93096 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTP4A1Q93096 AL731566.1-201ENST00000620490 1937 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 SRRM1P3-201ENST00000426911 2678 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 LYPLA1P3-201ENST00000402650 695 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 SNORA11.5-201ENST00000408163 128 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 MIR1282-201ENST00000408865 101 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 RPL34P3-201ENST00000421454 338 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 KCTD9P1-201ENST00000430462 1167 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 HMGB3P9-201ENST00000441799 583 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC092685.1-201ENST00000447960 1243 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 AP000547.1-201ENST00000454360 617 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC010683.1-201ENST00000473673 378 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 OR52A4P-202ENST00000481634 799 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 PGBD4P4-201ENST00000509673 613 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 CYCSP22-201ENST00000517555 339 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 PDCD5P1-201ENST00000543528 309 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 AP005403.1-201ENST00000579720 229 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 AP000769.2-201ENST00000602344 396 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC100767.2-201ENST00000604840 693 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC100847.1-201ENST00000611316 481 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 AC131238.1-201ENST00000617135 328 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 MIR6861-201ENST00000618657 64 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 AL356490.1-201ENST00000623079 479 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 MIR193BHG-214ENST00000641765 509 ntBASIC4.89□□□□□ -1.63
PTP4A1Q93096 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTP4A1Q93096 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.89□□□□□ -1.63
PTP4A1Q93096 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTP4A1Q93096 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PTP4A1Q93096 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms