Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC096996.1-201ENST00000563813 325 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AC109446.2-201ENST00000567872 497 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AC005951.1-201ENST00000576706 485 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC4Q92889 MIR4776-2-201ENST00000580204 80 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AC061975.8-201ENST00000587058 721 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AC010503.3-201ENST00000594355 540 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AL121895.2-201ENST00000619558 447 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AP002782.1-201ENST00000623107 614 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 AC005618.4-201ENST00000625053 554 ntBASIC6.44□□□□□ -1.38
ERCC4Q92889 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.44□□□□□ -1.38
ERCC4Q92889 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
ERCC4Q92889 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
ERCC4Q92889 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
ERCC4Q92889 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
ERCC4Q92889 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AL132640.2-201ENST00000559968 1698 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
ERCC4Q92889 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC4Q92889 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC4Q92889 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC4Q92889 RNA5SP500-201ENST00000364486 119 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ERCC4Q92889 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC4Q92889 RNU4-74P-201ENST00000411280 161 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 RPL26P37-201ENST00000411983 438 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC4Q92889 NENFP1-201ENST00000419476 466 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 DSTNP5-201ENST00000427921 523 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 DEFA9P-201ENST00000433042 285 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 NPM1P18-201ENST00000434232 732 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 ATP5LP2-201ENST00000440646 311 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AC097463.1-201ENST00000447288 481 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AL096803.2-201ENST00000450032 677 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC4Q92889 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC4Q92889 RN7SL193P-201ENST00000491708 276 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 OR7E157P-201ENST00000494376 911 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 AC109464.1-201ENST00000511091 819 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC4Q92889 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.43□□□□□ -1.38
ERCC4Q92889 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AL163952.1-202ENST00000569625 600 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 AC002310.3-201ENST00000569728 723 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.43□□□□□ -1.38
ERCC4Q92889 AC068790.2-201ENST00000602601 557 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 AL139099.4-201ENST00000614802 114 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 AC123767.1-202ENST00000620407 817 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.43□□□□□ -1.38
ERCC4Q92889 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.43□□□□□ -1.38
ERCC4Q92889 OR8G3P-202ENST00000641572 1255 ntBASIC6.43□□□□□ -1.38
ERCC4Q92889 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC4Q92889 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC4Q92889 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ERCC4Q92889 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.43□□□□□ -1.38
ERCC4Q92889 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
ERCC4Q92889 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
ERCC4Q92889 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
ERCC4Q92889 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC4Q92889 KARSP1-201ENST00000451871 1752 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC4Q92889 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ERCC4Q92889 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ERCC4Q92889 AC005042.1-201ENST00000393397 800 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 HNRNPDP2-201ENST00000406475 478 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 RNA5SP431-201ENST00000410312 120 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 HSFY4P-201ENST00000415994 1181 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC4Q92889 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ERCC4Q92889 RPS3AP37-201ENST00000419176 745 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 BX323845.3-201ENST00000428215 527 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC4Q92889 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.42□□□□□ -1.38
ERCC4Q92889 PCNPP2-201ENST00000441651 455 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC4Q92889 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.42□□□□□ -1.38
ERCC4Q92889 AL589880.1-201ENST00000448271 287 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 OR7E116P-201ENST00000448529 957 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.42□□□□□ -1.38
ERCC4Q92889 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.42□□□□□ -1.38
ERCC4Q92889 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.42□□□□□ -1.38
ERCC4Q92889 RPS27AP16-201ENST00000492222 470 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 AC091435.1-201ENST00000505442 584 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 MTND1P22-201ENST00000510572 951 ntBASIC6.42□□□□□ -1.38
ERCC4Q92889 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms