Protein–RNA interactions for Protein: Q8N448

LNX2, Ligand of Numb protein X 2, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX2Q8N448 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 AC083795.1-201ENST00000491760 320 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 RN7SL284P-201ENST00000498823 275 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LNX2Q8N448 USP9YP5-201ENST00000511770 630 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.38□□□□□ -1.55
LNX2Q8N448 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.38□□□□□ -1.55
LNX2Q8N448 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.38□□□□□ -1.55
LNX2Q8N448 AC036111.2-201ENST00000533247 901 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 AC090424.1-201ENST00000535243 736 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.38□□□□□ -1.55
LNX2Q8N448 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.38□□□□□ -1.55
LNX2Q8N448 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.38□□□□□ -1.55
LNX2Q8N448 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.38□□□□□ -1.55
LNX2Q8N448 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.38□□□□□ -1.55
LNX2Q8N448 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.38□□□□□ -1.55
LNX2Q8N448 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.38□□□□□ -1.55
LNX2Q8N448 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LNX2Q8N448 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.38□□□□□ -1.55
LNX2Q8N448 AL590229.1-201ENST00000603497 542 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 AL163642.2-201ENST00000604722 1019 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 AC018618.2-201ENST00000604770 446 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.38□□□□□ -1.55
LNX2Q8N448 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.38□□□□□ -1.55
LNX2Q8N448 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 uc_338.26-201ENST00000612659 160 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 AC139769.3-201ENST00000618383 175 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.38□□□□□ -1.55
LNX2Q8N448 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.38□□□□□ -1.55
LNX2Q8N448 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.38□□□□□ -1.55
LNX2Q8N448 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
LNX2Q8N448 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.38□□□□□ -1.55
LNX2Q8N448 ZNF542P-204ENST00000482727 1305 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.38□□□□□ -1.55
LNX2Q8N448 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 AC111188.2-201ENST00000529697 1387 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 PROS2P-201ENST00000474651 1951 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 SGO1P1-201ENST00000603525 1447 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 CASC19-260ENST00000641828 2001 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 MTCO1P28-201ENST00000574177 1528 ntBASIC5.38□□□□□ -1.55
LNX2Q8N448 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LNX2Q8N448 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 AC138907.8-201ENST00000623981 2256 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 NACA3P-201ENST00000359690 648 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 FABP12P1-201ENST00000401911 322 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AL121978.1-201ENST00000402778 359 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LNX2Q8N448 Y_RNA.619-201ENST00000410951 90 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.37□□□□□ -1.55
LNX2Q8N448 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 TNPO1P1-201ENST00000423641 1138 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 RPS3AP44-201ENST00000425466 790 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AL593851.1-201ENST00000426171 157 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.37□□□□□ -1.55
LNX2Q8N448 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LNX2Q8N448 MTCO2P16-201ENST00000436962 677 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 ISCA1P2-201ENST00000438679 421 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.37□□□□□ -1.55
LNX2Q8N448 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.37□□□□□ -1.55
LNX2Q8N448 ZNF619P1-201ENST00000446539 752 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 MTND6P5-201ENST00000448266 512 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AC009961.3-201ENST00000449832 765 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.37□□□□□ -1.55
LNX2Q8N448 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 AC104164.1-201ENST00000460282 590 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AC044810.1-201ENST00000480271 711 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.37□□□□□ -1.55
LNX2Q8N448 HPRT1P2-201ENST00000505250 544 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.37□□□□□ -1.55
LNX2Q8N448 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LNX2Q8N448 AC010625.1-201ENST00000511296 403 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 RNU6-759P-201ENST00000516740 103 ntBASIC5.37□□□□□ -1.55
LNX2Q8N448 RNU6-232P-201ENST00000517144 64 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms