Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 uc_338.7-201ENST00000621834 124 ntBASIC5.71□□□□□ -1.5
VSTM1Q6UX27 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
VSTM1Q6UX27 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.71□□□□□ -1.5
VSTM1Q6UX27 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VSTM1Q6UX27 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VSTM1Q6UX27 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.71□□□□□ -1.5
VSTM1Q6UX27 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VSTM1Q6UX27 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VSTM1Q6UX27 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.71□□□□□ -1.5
VSTM1Q6UX27 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 SNORD56.6-201ENST00000384569 71 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 NANOGP4-201ENST00000427230 913 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC135999.1-201ENST00000478962 479 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 NPM1P29-201ENST00000483112 803 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC121161.1-201ENST00000510606 652 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC093770.1-201ENST00000511559 571 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC016550.3-201ENST00000515706 767 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC027308.1-201ENST00000517993 110 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AP004607.2-201ENST00000533949 322 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC139103.1-201ENST00000534696 1030 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 RN7SL356P-201ENST00000582228 248 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC012213.4-201ENST00000606457 354 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AC009974.1-201ENST00000608881 455 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AL096803.3-201ENST00000609032 532 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 SAMMSON-227ENST00000642114 1199 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 AL121839.2-201ENST00000565058 6943 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.7□□□□□ -1.5
VSTM1Q6UX27 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.7□□□□□ -1.5
VSTM1Q6UX27 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 OR10AB1P-202ENST00000641219 1686 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC017002.4-201ENST00000604721 1525 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC079097.1-201ENST00000512187 1399 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 OR55B1P-203ENST00000641518 2602 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 RNU1-149P-201ENST00000390870 161 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 DBIP1-201ENST00000401435 260 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 RN7SKP278-201ENST00000410504 342 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 TCEA1P2-201ENST00000420496 906 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AL139148.1-201ENST00000427122 680 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC073465.2-201ENST00000440938 498 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AL035090.1-201ENST00000454835 332 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC092754.1-201ENST00000472975 479 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC072052.1-201ENST00000496556 306 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 PPM1AP1-201ENST00000502740 1135 ntBASIC5.69□□□□□ -1.5
VSTM1Q6UX27 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.69□□□□□ -1.5
VSTM1Q6UX27 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms