Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC073348.1-201ENST00000623002 331 ntBASIC8.25□□□□□ -1.09
RC3H1Q5TC82 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
RC3H1Q5TC82 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 MTCO1P9-201ENST00000505577 1534 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 RNU6-254P-201ENST00000363377 107 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 RNU6-549P-201ENST00000384433 107 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 RNU6-738P-201ENST00000384531 106 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC009310.1-201ENST00000414414 451 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AL121878.1-201ENST00000418638 859 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 RNGTTP1-201ENST00000420965 728 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AL512286.1-201ENST00000439244 400 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 PPIAP7-201ENST00000454070 489 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 NXT1P1-201ENST00000458481 316 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 MTND1P16-201ENST00000465177 898 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AF235103.2-201ENST00000525753 346 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AP000620.1-201ENST00000527147 504 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 CYP2C60P-201ENST00000566088 139 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 MIR548AB-201ENST00000584917 84 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AL359535.1-201ENST00000612100 1087 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 MESTIT1_2.1-201ENST00000616328 235 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AL158196.1-201ENST00000616786 434 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC120057.5-201ENST00000623840 154 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC120349.2-201ENST00000625002 298 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC183089.2-201ENST00000637931 916 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AP002833.3-201ENST00000625075 2265 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 AC011592.1-201ENST00000624647 3634 ntBASIC8.24□□□□□ -1.09
RC3H1Q5TC82 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RC3H1Q5TC82 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 SYF2-202ENST00000354361 926 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 RNA5SP110-201ENST00000362638 115 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 RNU6-1090P-201ENST00000364065 94 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 RNU6-353P-201ENST00000364266 108 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 RNA5SP510-201ENST00000364697 99 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 MIR130B-202ENST00000385018 82 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC068533.2-201ENST00000411872 306 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 DUTP4-201ENST00000424782 475 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AL513185.2-201ENST00000425543 193 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC007742.1-201ENST00000425789 329 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC073464.1-201ENST00000429823 534 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 ETF1P3-201ENST00000430422 1160 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 ELOCP26-201ENST00000436067 329 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 DEFA11P-201ENST00000446470 261 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 RAD23BP3-201ENST00000454157 1152 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC022336.1-201ENST00000475510 337 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 RN7SL174P-201ENST00000475578 289 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 PDLIM1P4-201ENST00000504327 1006 ntBASIC8.23□□□□□ -1.09
RC3H1Q5TC82 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC8.23□□□□□ -1.09
RC3H1Q5TC82 ATP1B1P1-201ENST00000509767 915 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms