Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.45□□□□□ -1.54
TPM4P67936 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM4P67936 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM4P67936 PANDAR-201ENST00000629595 1506 ntBASIC5.44□□□□□ -1.54
TPM4P67936 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM4P67936 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.44□□□□□ -1.54
TPM4P67936 SNORA79B-201ENST00000410557 148 ntBASIC5.44□□□□□ -1.54
TPM4P67936 CEACAMP8-201ENST00000413902 580 ntBASIC5.44□□□□□ -1.54
TPM4P67936 AC004690.1-201ENST00000418216 328 ntBASIC5.44□□□□□ -1.54
TPM4P67936 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM4P67936 IPPKP1-201ENST00000422501 768 ntBASIC5.44□□□□□ -1.54
TPM4P67936 FABP7P1-201ENST00000424004 391 ntBASIC5.44□□□□□ -1.54
TPM4P67936 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TPM4P67936 TCEA1P1-201ENST00000449716 880 ntBASIC5.44□□□□□ -1.54
TPM4P67936 IGHV5-78-201ENST00000450948 295 ntBASIC5.44□□□□□ -1.54
TPM4P67936 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TPM4P67936 RPS6P2-201ENST00000454208 705 ntBASIC5.44□□□□□ -1.54
TPM4P67936 AC084754.1-201ENST00000463466 464 ntBASIC5.44□□□□□ -1.54
TPM4P67936 AC009127.1-201ENST00000467090 155 ntBASIC5.44□□□□□ -1.54
TPM4P67936 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM4P67936 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM4P67936 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM4P67936 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.44□□□□□ -1.54
TPM4P67936 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM4P67936 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TPM4P67936 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.44□□□□□ -1.54
TPM4P67936 AL499605.1-201ENST00000604628 403 ntBASIC5.44□□□□□ -1.54
TPM4P67936 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.44□□□□□ -1.54
TPM4P67936 AC015804.1-201ENST00000622935 435 ntBASIC5.44□□□□□ -1.54
TPM4P67936 AC006453.5-201ENST00000636451 619 ntBASIC5.44□□□□□ -1.54
TPM4P67936 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM4P67936 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.44□□□□□ -1.54
TPM4P67936 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM4P67936 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.44□□□□□ -1.54
TPM4P67936 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM4P67936 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM4P67936 CASC19-255ENST00000641733 1385 ntBASIC5.43□□□□□ -1.54
TPM4P67936 RNF19BPY-201ENST00000458209 1550 ntBASIC5.43□□□□□ -1.54
TPM4P67936 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TPM4P67936 MIR137-201ENST00000385223 102 ntBASIC5.43□□□□□ -1.54
TPM4P67936 AL080315.1-201ENST00000406055 466 ntBASIC5.43□□□□□ -1.54
TPM4P67936 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM4P67936 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TPM4P67936 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM4P67936 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.43□□□□□ -1.54
TPM4P67936 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM4P67936 OR7E125P-201ENST00000443450 846 ntBASIC5.43□□□□□ -1.54
TPM4P67936 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM4P67936 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.43□□□□□ -1.54
TPM4P67936 HMGN1P2-201ENST00000445197 310 ntBASIC5.43□□□□□ -1.54
TPM4P67936 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM4P67936 AC005008.1-201ENST00000456151 612 ntBASIC5.43□□□□□ -1.54
TPM4P67936 YRDCP3-201ENST00000456507 480 ntBASIC5.43□□□□□ -1.54
TPM4P67936 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TPM4P67936 DEFB109F-201ENST00000491870 277 ntBASIC5.43□□□□□ -1.54
TPM4P67936 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM4P67936 STMN1P2-201ENST00000508435 439 ntBASIC5.43□□□□□ -1.54
TPM4P67936 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.43□□□□□ -1.54
TPM4P67936 AC026688.1-201ENST00000520639 1168 ntBASIC5.43□□□□□ -1.54
TPM4P67936 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM4P67936 AL358913.1-201ENST00000554342 121 ntBASIC5.43□□□□□ -1.54
TPM4P67936 AC135626.1-201ENST00000556983 435 ntBASIC5.43□□□□□ -1.54
TPM4P67936 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.43□□□□□ -1.54
TPM4P67936 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TPM4P67936 AC095055.1-201ENST00000603472 1113 ntBASIC5.43□□□□□ -1.54
TPM4P67936 COX6CP4-201ENST00000605798 228 ntBASIC5.43□□□□□ -1.54
TPM4P67936 AC244517.3-201ENST00000616254 1235 ntBASIC5.43□□□□□ -1.54
TPM4P67936 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM4P67936 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.43□□□□□ -1.54
TPM4P67936 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM4P67936 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TPM4P67936 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TPM4P67936 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.43□□□□□ -1.54
TPM4P67936 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.43□□□□□ -1.54
TPM4P67936 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TPM4P67936 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TPM4P67936 SNORA17.1-201ENST00000362945 126 ntBASIC5.42□□□□□ -1.54
TPM4P67936 AC007068.1-201ENST00000396690 844 ntBASIC5.42□□□□□ -1.54
TPM4P67936 RPS24P12-201ENST00000402084 394 ntBASIC5.42□□□□□ -1.54
TPM4P67936 RN7SKP126-201ENST00000411143 300 ntBASIC5.42□□□□□ -1.54
TPM4P67936 AC009237.10-201ENST00000414112 510 ntBASIC5.42□□□□□ -1.54
TPM4P67936 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TPM4P67936 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.42□□□□□ -1.54
TPM4P67936 PPIAP13-201ENST00000434706 478 ntBASIC5.42□□□□□ -1.54
TPM4P67936 AL451139.1-201ENST00000434718 346 ntBASIC5.42□□□□□ -1.54
TPM4P67936 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
TPM4P67936 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.42□□□□□ -1.54
TPM4P67936 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.42□□□□□ -1.54
TPM4P67936 RPL31P15-201ENST00000449770 338 ntBASIC5.42□□□□□ -1.54
TPM4P67936 RPS26P41-201ENST00000450370 284 ntBASIC5.42□□□□□ -1.54
TPM4P67936 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.42□□□□□ -1.54
TPM4P67936 AC104971.1-201ENST00000495117 578 ntBASIC5.42□□□□□ -1.54
TPM4P67936 RPS4XP18-201ENST00000495480 763 ntBASIC5.42□□□□□ -1.54
TPM4P67936 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.42□□□□□ -1.54
TPM4P67936 RNU6-709P-201ENST00000517257 104 ntBASIC5.42□□□□□ -1.54
TPM4P67936 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.42□□□□□ -1.54
TPM4P67936 GSTP1P1-201ENST00000548078 319 ntBASIC5.42□□□□□ -1.54
TPM4P67936 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.42□□□□□ -1.54
TPM4P67936 AC008126.1-201ENST00000549019 480 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms