Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPFP62306 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.2□□□□□ -1.58
SNRPFP62306 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.2□□□□□ -1.58
SNRPFP62306 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPFP62306 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SNRPFP62306 THAP12P5-201ENST00000405864 2275 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
SNRPFP62306 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.2□□□□□ -1.58
SNRPFP62306 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.2□□□□□ -1.58
SNRPFP62306 RPL7P57-201ENST00000423238 740 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 RPS26P2-201ENST00000440331 348 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPFP62306 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPFP62306 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPFP62306 AL591473.1-201ENST00000464297 313 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.2□□□□□ -1.58
SNRPFP62306 RN7SKP46-201ENST00000515942 234 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.2□□□□□ -1.58
SNRPFP62306 BRD9P1-201ENST00000529855 560 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 MIR3934-201ENST00000579806 107 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 AL049840.6-202ENST00000603373 279 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.2□□□□□ -1.58
SNRPFP62306 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPFP62306 AC090510.2-201ENST00000617465 629 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SNRPFP62306 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.2□□□□□ -1.58
SNRPFP62306 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SNRPFP62306 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SNRPFP62306 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPFP62306 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SNRPFP62306 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPFP62306 AC018628.1-201ENST00000624147 3819 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPFP62306 AL442639.1-201ENST00000625030 1899 ntBASIC5.2□□□□□ -1.58
SNRPFP62306 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNRPFP62306 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SNRPFP62306 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SNRPFP62306 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.19□□□□□ -1.58
SNRPFP62306 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 SNORA74A-201ENST00000364089 198 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 RNA5SP87-201ENST00000384155 118 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 NPM1P40-201ENST00000412758 733 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.19□□□□□ -1.58
SNRPFP62306 RPL36AP10-201ENST00000421785 322 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.19□□□□□ -1.58
SNRPFP62306 H2AFZP5-201ENST00000446960 382 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.19□□□□□ -1.58
SNRPFP62306 RPS3AP41-201ENST00000462701 778 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.19□□□□□ -1.58
SNRPFP62306 AC091868.1-201ENST00000508746 304 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.19□□□□□ -1.58
SNRPFP62306 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.19□□□□□ -1.58
SNRPFP62306 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.19□□□□□ -1.58
SNRPFP62306 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.19□□□□□ -1.58
SNRPFP62306 OR1F2P-201ENST00000570470 933 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.19□□□□□ -1.58
SNRPFP62306 MIR4472-2-201ENST00000582069 67 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 MIR3936-201ENST00000584304 110 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 AC097505.1-201ENST00000610199 565 ntBASIC5.19□□□□□ -1.58
SNRPFP62306 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.19□□□□□ -1.58
SNRPFP62306 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SNRPFP62306 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNRPFP62306 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SNRPFP62306 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNRPFP62306 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNRPFP62306 MAPK10-320ENST00000641462 6696 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.18□□□□□ -1.58
SNRPFP62306 AL031119.1-201ENST00000404707 1879 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SNRPFP62306 AL133270.1-201ENST00000402635 279 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 AL592291.1-201ENST00000403830 352 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 RN7SKP267-201ENST00000410381 285 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 OR51B3P-201ENST00000412287 913 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 AL591848.1-201ENST00000413092 322 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.18□□□□□ -1.58
SNRPFP62306 EIF4A1P1-201ENST00000420241 934 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.18□□□□□ -1.58
SNRPFP62306 RPL7P61-201ENST00000451721 751 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 RPS3AP53-201ENST00000454716 778 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 AL445433.1-201ENST00000457507 257 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 AC063943.1-201ENST00000465434 453 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 AC090142.1-201ENST00000465776 462 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 AC092324.1-201ENST00000468671 324 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 RPL32P9-201ENST00000487963 407 ntBASIC5.18□□□□□ -1.58
SNRPFP62306 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNRPFP62306 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.18□□□□□ -1.58
SNRPFP62306 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.18□□□□□ -1.58
SNRPFP62306 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.18□□□□□ -1.58
SNRPFP62306 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.18□□□□□ -1.58
SNRPFP62306 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SNRPFP62306 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SNRPFP62306 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms