Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC113398.2-201ENST00000507630 558 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 NDUFB5P1-201ENST00000508134 564 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 COX6B1P5-201ENST00000509843 249 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN18P56856 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN18P56856 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 OR5AZ1P-201ENST00000527448 943 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 OR7E128P-201ENST00000532736 1024 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN18P56856 EIF3FP1-201ENST00000613970 806 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN18P56856 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
CLDN18P56856 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 AC004817.4-201ENST00000602396 3625 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN18P56856 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN18P56856 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.58□□□□□ -1.68
CLDN18P56856 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CLDN18P56856 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN18P56856 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN18P56856 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLDN18P56856 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 CASC19-221ENST00000641309 1382 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 RNA5SP123-201ENST00000363244 119 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 AL136131.1-201ENST00000406079 803 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 AL390316.1-201ENST00000406279 553 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN18P56856 AL590762.4-201ENST00000425885 253 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN18P56856 BX323845.1-201ENST00000432417 179 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN18P56856 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN18P56856 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 AC109635.6-201ENST00000525487 1113 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN18P56856 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN18P56856 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLDN18P56856 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN18P56856 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN18P56856 OR1F2P-201ENST00000570470 933 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 AC233702.9-201ENST00000581528 203 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN18P56856 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN18P56856 AC105254.2-201ENST00000603636 436 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 AC024940.4-201ENST00000605507 246 ntBASIC4.57□□□□□ -1.68
CLDN18P56856 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN18P56856 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN18P56856 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN18P56856 VPS35P1-201ENST00000563400 1518 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN18P56856 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN18P56856 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLDN18P56856 AC026523.2-201ENST00000625039 7739 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLDN18P56856 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN18P56856 AC007996.1-201ENST00000620414 2821 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 STX3-208ENST00000641815 3236 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN18P56856 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CLDN18P56856 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN18P56856 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN18P56856 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN18P56856 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CLDN18P56856 RNA5SP428-201ENST00000365129 132 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN18P56856 SNORA2.3-201ENST00000383920 135 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 SNORA66-201ENST00000384792 133 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 MIR550A3-201ENST00000390735 95 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 RPS26P13-201ENST00000419030 330 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 AL136231.1-201ENST00000429407 730 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 AL354714.3-201ENST00000447284 493 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN18P56856 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN18P56856 TRY2P-201ENST00000448860 689 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN18P56856 SBDSP1-204ENST00000453858 737 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 RN7SL244P-201ENST00000493405 297 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 AC010350.1-201ENST00000504908 231 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.56□□□□□ -1.68
CLDN18P56856 AC098976.1-201ENST00000513014 541 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 RNA5SP43-201ENST00000516559 110 ntBASIC4.56□□□□□ -1.68
CLDN18P56856 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms