Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN12P56749 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN12P56749 TMX2P1-201ENST00000436507 708 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN12P56749 RN7SL547P-201ENST00000490793 290 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN12P56749 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN12P56749 RNA5SP360-201ENST00000516555 118 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 AC026688.1-201ENST00000520639 1168 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN12P56749 AC027544.3-201ENST00000535082 757 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 SULT1C2P2-201ENST00000562517 294 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN12P56749 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN12P56749 AC087283.1-201ENST00000604029 1074 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 SNORD91B-202ENST00000608459 222 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 AC109309.2-201ENST00000612597 332 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN12P56749 RNF19BPY-201ENST00000458209 1550 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 AC104118.1-201ENST00000607625 1589 ntBASIC4.26□□□□□ -1.73
CLDN12P56749 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLDN12P56749 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN12P56749 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN12P56749 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN12P56749 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN12P56749 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN12P56749 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN12P56749 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CLDN12P56749 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 AC108751.5-201ENST00000492880 1336 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.25□□□□□ -1.73
CLDN12P56749 UGT2B26P-201ENST00000508672 1613 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN12P56749 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN12P56749 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLDN12P56749 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN12P56749 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 AC092435.4-201ENST00000623012 4159 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLDN12P56749 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
CLDN12P56749 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLDN12P56749 RNA5SP284-201ENST00000384547 118 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 RN7SKP114-201ENST00000410327 279 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLDN12P56749 Z80107.2-201ENST00000445127 392 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 TDGF1P1-201ENST00000445734 527 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AC073587.1-201ENST00000447093 876 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 TCEA1P1-201ENST00000449716 880 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 OTX2P1-201ENST00000450956 354 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 YWHAEP1-201ENST00000453697 763 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN12P56749 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN12P56749 AC007998.1-201ENST00000474156 672 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 RPS4XP18-201ENST00000495480 763 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN12P56749 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN12P56749 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN12P56749 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AC022826.1-201ENST00000519383 805 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN12P56749 TOMM20P1-201ENST00000534518 427 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN12P56749 AC135626.1-201ENST00000556983 435 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN12P56749 AC134669.1-201ENST00000581275 672 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN12P56749 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN12P56749 OR7M1P-201ENST00000608946 533 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AC097505.1-201ENST00000610199 565 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN12P56749 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN12P56749 AL049794.2-201ENST00000616301 365 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AC234782.5-201ENST00000617723 324 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AC005840.5-201ENST00000619166 599 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 SAMMSON-209ENST00000641222 1100 ntBASIC4.25□□□□□ -1.73
CLDN12P56749 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.25□□□□□ -1.73
CLDN12P56749 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLDN12P56749 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLDN12P56749 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLDN12P56749 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CLDN12P56749 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN12P56749 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN12P56749 MIPEPP2-201ENST00000422560 1819 ntBASIC4.24□□□□□ -1.73
CLDN12P56749 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN12P56749 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN12P56749 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLDN12P56749 RNA5SP510-201ENST00000364697 99 ntBASIC4.24□□□□□ -1.73
CLDN12P56749 SNORA67-201ENST00000384423 137 ntBASIC4.24□□□□□ -1.73
CLDN12P56749 ATP5HP3-201ENST00000396994 486 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms