Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 KARSP1-201ENST00000451871 1752 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC107068.1-201ENST00000563286 4218 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PKNOX1P55347 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PKNOX1P55347 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.84□□□□□ -1.63
PKNOX1P55347 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PKNOX1P55347 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PKNOX1P55347 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PKNOX1P55347 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PKNOX1P55347 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PKNOX1P55347 OR56A4-201ENST00000330728 1209 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 RAB5CP1-201ENST00000395972 580 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 DUTP5-201ENST00000406790 469 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 RN7SKP125-201ENST00000410481 302 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 RN7SKP126-201ENST00000411143 300 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.84□□□□□ -1.63
PKNOX1P55347 AC092162.1-201ENST00000432828 434 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 AC073052.1-201ENST00000440417 714 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.84□□□□□ -1.63
PKNOX1P55347 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.84□□□□□ -1.63
PKNOX1P55347 AC239798.3-201ENST00000454459 408 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.84□□□□□ -1.63
PKNOX1P55347 AP000942.1-201ENST00000463969 747 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 OR2AO1P-201ENST00000476497 403 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 AC020890.1-201ENST00000491837 504 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 AC073358.1-201ENST00000505671 684 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.84□□□□□ -1.63
PKNOX1P55347 AP002981.1-201ENST00000517692 975 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.84□□□□□ -1.63
PKNOX1P55347 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.84□□□□□ -1.63
PKNOX1P55347 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PKNOX1P55347 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.84□□□□□ -1.63
PKNOX1P55347 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PKNOX1P55347 AL049794.2-201ENST00000616301 365 ntBASIC4.84□□□□□ -1.63
PKNOX1P55347 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PKNOX1P55347 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PKNOX1P55347 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PKNOX1P55347 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.84□□□□□ -1.63
PKNOX1P55347 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PKNOX1P55347 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.84□□□□□ -1.64
PKNOX1P55347 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.84□□□□□ -1.64
PKNOX1P55347 DHX9P1-201ENST00000436565 3076 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 AC097461.1-201ENST00000568928 2821 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKNOX1P55347 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 NEAT1-202ENST00000501122 22743 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKNOX1P55347 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.83□□□□□ -1.64
PKNOX1P55347 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.83□□□□□ -1.64
PKNOX1P55347 RN7SKP15-201ENST00000364742 309 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 SNORA70.10-201ENST00000384515 134 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PKNOX1P55347 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 AL355994.1-201ENST00000424379 260 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 AC079807.1-201ENST00000429993 481 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 CFL1P1-202ENST00000432948 411 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.83□□□□□ -1.64
PKNOX1P55347 RHEBP2-201ENST00000450289 600 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 AC144530.1-201ENST00000452862 555 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 AC011225.1-201ENST00000457751 369 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 RN7SL515P-201ENST00000463999 297 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.83□□□□□ -1.64
PKNOX1P55347 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.83□□□□□ -1.64
PKNOX1P55347 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 Y_RNA.719-201ENST00000517156 106 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.83□□□□□ -1.64
PKNOX1P55347 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.83□□□□□ -1.64
PKNOX1P55347 AP002373.2-201ENST00000541631 1060 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 NMNAT1P1-201ENST00000554095 876 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.83□□□□□ -1.64
PKNOX1P55347 AL390726.5-202ENST00000564800 256 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.83□□□□□ -1.64
PKNOX1P55347 AC026124.2-201ENST00000621847 656 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 OR8A1-204ENST00000642111 1145 ntBASIC4.83□□□□□ -1.64
PKNOX1P55347 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.83□□□□□ -1.64
PKNOX1P55347 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKNOX1P55347 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PKNOX1P55347 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKNOX1P55347 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PKNOX1P55347 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PKNOX1P55347 ECM1P2-201ENST00000503354 1577 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.82□□□□□ -1.64
PKNOX1P55347 AL133268.1-201ENST00000405676 1401 ntBASIC4.82□□□□□ -1.64
PKNOX1P55347 MTCO1P22-201ENST00000604619 1360 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms