Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.09□□□□□ -1.59
PDX1P52945 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.09□□□□□ -1.59
PDX1P52945 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PDX1P52945 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PDX1P52945 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.09□□□□□ -1.6
PDX1P52945 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDX1P52945 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.09□□□□□ -1.6
PDX1P52945 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDX1P52945 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.08□□□□□ -1.6
PDX1P52945 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDX1P52945 AC003973.3-201ENST00000624863 2822 ntBASIC5.08□□□□□ -1.6
PDX1P52945 MAPK10-338ENST00000641647 3362 ntBASIC5.08□□□□□ -1.6
PDX1P52945 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PDX1P52945 DDX18P6-201ENST00000450119 1997 ntBASIC5.08□□□□□ -1.6
PDX1P52945 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 RNVU1-6-201ENST00000364688 164 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AL035419.1-201ENST00000397037 564 ntBASIC5.08□□□□□ -1.6
PDX1P52945 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.08□□□□□ -1.6
PDX1P52945 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.08□□□□□ -1.6
PDX1P52945 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PDX1P52945 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.08□□□□□ -1.6
PDX1P52945 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.08□□□□□ -1.6
PDX1P52945 AL157884.3-201ENST00000448273 1184 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AC092324.1-201ENST00000468671 324 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AC090602.1-201ENST00000469695 252 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.08□□□□□ -1.6
PDX1P52945 RNU6-889P-201ENST00000517189 103 ntBASIC5.08□□□□□ -1.6
PDX1P52945 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.08□□□□□ -1.6
PDX1P52945 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.08□□□□□ -1.6
PDX1P52945 AC137768.1-201ENST00000549998 553 ntBASIC5.08□□□□□ -1.6
PDX1P52945 CR383656.6-201ENST00000550518 394 ntBASIC5.08□□□□□ -1.6
PDX1P52945 CKS1BP1-201ENST00000555221 240 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 AC019322.1-201ENST00000571869 389 ntBASIC5.08□□□□□ -1.6
PDX1P52945 MIR4330-201ENST00000579077 105 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.08□□□□□ -1.6
PDX1P52945 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 AC093799.2-201ENST00000610062 578 ntBASIC5.08□□□□□ -1.6
PDX1P52945 uc_338.18-201ENST00000615451 175 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDX1P52945 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 MIR6810-201ENST00000622701 70 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AC015660.5-201ENST00000623238 564 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 AC073869.8-201ENST00000641806 335 ntBASIC5.08□□□□□ -1.6
PDX1P52945 AP005435.3-201ENST00000531260 3198 ntBASIC5.08□□□□□ -1.6
PDX1P52945 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDX1P52945 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDX1P52945 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDX1P52945 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.08□□□□□ -1.6
PDX1P52945 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PDX1P52945 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.08□□□□□ -1.6
PDX1P52945 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.08□□□□□ -1.6
PDX1P52945 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDX1P52945 AC068446.1-201ENST00000556425 1549 ntBASIC5.07□□□□□ -1.6
PDX1P52945 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 U3.3-201ENST00000362986 216 ntBASIC5.07□□□□□ -1.6
PDX1P52945 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDX1P52945 AL672167.2-201ENST00000377164 879 ntBASIC5.07□□□□□ -1.6
PDX1P52945 GPS2P1-201ENST00000411761 986 ntBASIC5.07□□□□□ -1.6
PDX1P52945 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 AC073464.3-201ENST00000422564 712 ntBASIC5.07□□□□□ -1.6
PDX1P52945 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 RHOT1P3-201ENST00000436571 331 ntBASIC5.07□□□□□ -1.6
PDX1P52945 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 RPL31P44-201ENST00000447680 377 ntBASIC5.07□□□□□ -1.6
PDX1P52945 BUD31P2-201ENST00000449374 300 ntBASIC5.07□□□□□ -1.6
PDX1P52945 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 MTND2P30-201ENST00000456663 382 ntBASIC5.07□□□□□ -1.6
PDX1P52945 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 RN7SL423P-201ENST00000486202 304 ntBASIC5.07□□□□□ -1.6
PDX1P52945 NPM1P28-201ENST00000492269 840 ntBASIC5.07□□□□□ -1.6
PDX1P52945 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.07□□□□□ -1.6
PDX1P52945 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.07□□□□□ -1.6
PDX1P52945 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.07□□□□□ -1.6
PDX1P52945 MTND3P24-201ENST00000506306 329 ntBASIC5.07□□□□□ -1.6
PDX1P52945 AC025768.1-201ENST00000510057 267 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms