Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 AC026403.1-201ENST00000518938 295 ntBASIC5.07□□□□□ -1.6
BRCA2P51587 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCA2P51587 AL357559.1-201ENST00000622228 274 ntBASIC5.07□□□□□ -1.6
BRCA2P51587 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCA2P51587 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
BRCA2P51587 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BRCA2P51587 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCA2P51587 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCA2P51587 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BRCA2P51587 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.06□□□□□ -1.6
BRCA2P51587 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
BRCA2P51587 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCA2P51587 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.06□□□□□ -1.6
BRCA2P51587 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 OR9K1P-202ENST00000641111 3217 ntBASIC5.06□□□□□ -1.6
BRCA2P51587 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
BRCA2P51587 AC007688.1-201ENST00000475592 759 ntBASIC5.06□□□□□ -1.6
BRCA2P51587 RPS27AP13-201ENST00000498403 237 ntBASIC5.06□□□□□ -1.6
BRCA2P51587 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
BRCA2P51587 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCA2P51587 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC5.06□□□□□ -1.6
BRCA2P51587 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 AL121950.1-201ENST00000624993 2077 ntBASIC5.06□□□□□ -1.6
BRCA2P51587 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 AP001157.1-201ENST00000550837 2339 ntBASIC5.06□□□□□ -1.6
BRCA2P51587 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.06□□□□□ -1.6
BRCA2P51587 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRCA2P51587 RNU6ATAC-201ENST00000408749 126 ntBASIC5.06□□□□□ -1.6
BRCA2P51587 RN7SL517P-201ENST00000462240 305 ntBASIC5.06□□□□□ -1.6
BRCA2P51587 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCA2P51587 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.06□□□□□ -1.6
BRCA2P51587 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BRCA2P51587 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC5.05□□□□□ -1.6
BRCA2P51587 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.05□□□□□ -1.6
BRCA2P51587 AC108467.2-201ENST00000617640 1597 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
BRCA2P51587 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.05□□□□□ -1.6
BRCA2P51587 RPL23AP38-201ENST00000423801 469 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
BRCA2P51587 PGBD4P4-201ENST00000509673 613 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
BRCA2P51587 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.05□□□□□ -1.6
BRCA2P51587 AC090515.3-201ENST00000560431 315 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 AC015908.5-201ENST00000623289 343 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.05□□□□□ -1.6
BRCA2P51587 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
BRCA2P51587 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
BRCA2P51587 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.05□□□□□ -1.6
BRCA2P51587 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
BRCA2P51587 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.05□□□□□ -1.6
BRCA2P51587 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
BRCA2P51587 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
BRCA2P51587 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.05□□□□□ -1.6
BRCA2P51587 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.05□□□□□ -1.6
BRCA2P51587 MRPL50P1-201ENST00000431951 384 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 NDUFA5P1-201ENST00000433858 341 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 MTND4LP31-201ENST00000514859 294 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.05□□□□□ -1.6
BRCA2P51587 MTCYBP13-201ENST00000578634 1093 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.05□□□□□ -1.6
BRCA2P51587 AC009093.8-201ENST00000641769 292 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.05□□□□□ -1.6
BRCA2P51587 AC068769.1-201ENST00000474767 2426 ntBASIC5.05□□□□□ -1.6
BRCA2P51587 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRCA2P51587 MIR7-3-201ENST00000384898 110 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 AC007068.1-201ENST00000396690 844 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.04□□□□□ -1.6
BRCA2P51587 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BRCA2P51587 GMPSP1-201ENST00000514075 579 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 RN7SKP13-201ENST00000515933 244 ntBASIC5.04□□□□□ -1.6
BRCA2P51587 DUX4L52-201ENST00000549363 777 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms