Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.19□□□□□ -1.58
HNF4AP41235 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HNF4AP41235 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
HNF4AP41235 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HNF4AP41235 OR1L6-202ENST00000373684 1044 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AL133388.1-201ENST00000404509 287 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AL512422.1-201ENST00000407033 553 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 RN7SKP293-201ENST00000411389 296 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AL158073.1-201ENST00000426848 1104 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC124944.2-201ENST00000429866 1242 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 MRPS33P4-201ENST00000434892 317 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 GAPDHP25-201ENST00000447061 1001 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.19□□□□□ -1.58
HNF4AP41235 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 PPIAP20-201ENST00000449839 135 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.19□□□□□ -1.58
HNF4AP41235 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.19□□□□□ -1.58
HNF4AP41235 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 RN7SL184P-201ENST00000488308 297 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 RN7SL547P-201ENST00000490793 290 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC090543.1-201ENST00000492168 485 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 RN7SL101P-201ENST00000496350 279 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC015864.1-201ENST00000496512 544 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AL136038.1-201ENST00000497246 351 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.19□□□□□ -1.58
HNF4AP41235 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.19□□□□□ -1.58
HNF4AP41235 AC093770.1-201ENST00000511559 571 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 RNU6-760P-201ENST00000516078 97 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.19□□□□□ -1.58
HNF4AP41235 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.19□□□□□ -1.58
HNF4AP41235 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.19□□□□□ -1.58
HNF4AP41235 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.19□□□□□ -1.58
HNF4AP41235 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.19□□□□□ -1.58
HNF4AP41235 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.19□□□□□ -1.58
HNF4AP41235 AP004607.2-201ENST00000533949 322 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.19□□□□□ -1.58
HNF4AP41235 AC008083.2-201ENST00000546707 476 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 NMNAT1P5-201ENST00000559657 841 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AP005262.1-201ENST00000582646 997 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC011445.2-201ENST00000599274 173 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AL049844.2-201ENST00000604280 628 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC000068.2-201ENST00000608816 460 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC239803.2-201ENST00000610161 430 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 uc_338.9-201ENST00000617424 182 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC009032.1-201ENST00000617574 431 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 MIR6729-201ENST00000618194 65 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC005840.5-201ENST00000619166 599 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC074276.2-201ENST00000619891 348 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 MIR8080-201ENST00000622224 89 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 AC020763.5-201ENST00000623298 430 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HNF4AP41235 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.19□□□□□ -1.58
HNF4AP41235 AL450345.1-202ENST00000605741 3881 ntBASIC5.19□□□□□ -1.58
HNF4AP41235 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HNF4AP41235 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HNF4AP41235 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HNF4AP41235 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HNF4AP41235 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HNF4AP41235 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HNF4AP41235 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HNF4AP41235 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.18□□□□□ -1.58
HNF4AP41235 BRAFP1-201ENST00000445336 2703 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HNF4AP41235 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HNF4AP41235 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.18□□□□□ -1.58
HNF4AP41235 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HNF4AP41235 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HNF4AP41235 RN7SKP153-201ENST00000365026 316 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 RNA5SP223-201ENST00000365174 120 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.18□□□□□ -1.58
HNF4AP41235 RN7SKP59-201ENST00000410520 314 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 RN7SKP247-201ENST00000411094 308 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.18□□□□□ -1.58
HNF4AP41235 CHEK2P5-201ENST00000423877 246 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.18□□□□□ -1.58
HNF4AP41235 AC090018.1-201ENST00000434369 367 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 CYCSP6-201ENST00000434498 302 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 RPL12P46-201ENST00000436610 195 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.18□□□□□ -1.58
HNF4AP41235 AL035090.1-201ENST00000454835 332 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 AC079168.1-201ENST00000458741 345 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.18□□□□□ -1.58
HNF4AP41235 NPM1P29-201ENST00000483112 803 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 RPS27AP16-201ENST00000492222 470 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 AC005912.1-201ENST00000495392 255 ntBASIC5.18□□□□□ -1.58
HNF4AP41235 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.18□□□□□ -1.58
HNF4AP41235 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.18□□□□□ -1.58
HNF4AP41235 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.18□□□□□ -1.58
HNF4AP41235 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms