Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.46□□□□□ -1.37
COL15A1P39059 AC090018.1-201ENST00000434369 367 ntBASIC6.46□□□□□ -1.37
COL15A1P39059 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.46□□□□□ -1.37
COL15A1P39059 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.46□□□□□ -1.37
COL15A1P39059 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL15A1P39059 MTND2P25-201ENST00000449028 610 ntBASIC6.46□□□□□ -1.37
COL15A1P39059 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
COL15A1P39059 RN7SL189P-201ENST00000468631 289 ntBASIC6.46□□□□□ -1.37
COL15A1P39059 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
COL15A1P39059 AC106806.2-201ENST00000509365 500 ntBASIC6.46□□□□□ -1.37
COL15A1P39059 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
COL15A1P39059 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.46□□□□□ -1.37
COL15A1P39059 IGKV1-32-201ENST00000519290 311 ntBASIC6.46□□□□□ -1.37
COL15A1P39059 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.46□□□□□ -1.37
COL15A1P39059 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.46□□□□□ -1.37
COL15A1P39059 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
COL15A1P39059 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.46□□□□□ -1.37
COL15A1P39059 FAM60CP-201ENST00000591086 664 ntBASIC6.46□□□□□ -1.37
COL15A1P39059 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.46□□□□□ -1.37
COL15A1P39059 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
COL15A1P39059 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
COL15A1P39059 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
COL15A1P39059 AL360270.2-201ENST00000562952 5985 ntBASIC6.46□□□□□ -1.37
COL15A1P39059 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL15A1P39059 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.46□□□□□ -1.38
COL15A1P39059 CCAT2-201ENST00000630920 1752 ntBASIC6.46□□□□□ -1.38
COL15A1P39059 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL15A1P39059 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL15A1P39059 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL15A1P39059 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.46□□□□□ -1.38
COL15A1P39059 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COL15A1P39059 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL15A1P39059 AL592494.2-201ENST00000425455 1548 ntBASIC6.46□□□□□ -1.38
COL15A1P39059 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.46□□□□□ -1.38
COL15A1P39059 CASC19-260ENST00000641828 2001 ntBASIC6.46□□□□□ -1.38
COL15A1P39059 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL15A1P39059 AC093297.3-201ENST00000607056 2517 ntBASIC6.46□□□□□ -1.38
COL15A1P39059 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL15A1P39059 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
COL15A1P39059 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.46□□□□□ -1.38
COL15A1P39059 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
COL15A1P39059 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
COL15A1P39059 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 RNU6-152P-201ENST00000384037 107 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 HMGB3P7-201ENST00000400214 611 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 AL589994.1-201ENST00000404962 340 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 AL357078.2-201ENST00000416486 427 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 AC069213.2-201ENST00000420238 366 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 RPL12P43-201ENST00000420608 499 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 ELOCP6-201ENST00000429066 328 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 ELOCP12-201ENST00000458706 328 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 AC006967.1-201ENST00000467608 589 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 RN7SL319P-201ENST00000480656 221 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.45□□□□□ -1.38
COL15A1P39059 AC117525.1-201ENST00000515228 503 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 OR10D4P-201ENST00000525892 951 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 RN7SL290P-201ENST00000578661 300 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.45□□□□□ -1.38
COL15A1P39059 BNIP3P27-201ENST00000599991 412 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 AL512782.1-201ENST00000603093 364 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 AC104687.2-201ENST00000604442 342 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.45□□□□□ -1.38
COL15A1P39059 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.45□□□□□ -1.38
COL15A1P39059 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.45□□□□□ -1.38
COL15A1P39059 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 CASC19-255ENST00000641733 1385 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL15A1P39059 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
COL15A1P39059 AC140134.1-201ENST00000511830 3544 ntBASIC6.45□□□□□ -1.38
COL15A1P39059 GLULP6-201ENST00000399502 913 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 COX6CP17-201ENST00000421389 185 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 DNAJC19P7-201ENST00000428811 344 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC009238.2-201ENST00000431026 355 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.44□□□□□ -1.38
COL15A1P39059 AC046176.1-201ENST00000435260 1170 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 AL158053.1-201ENST00000441503 453 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 TPT1P12-201ENST00000448968 492 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 BX842559.2-201ENST00000451418 605 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.44□□□□□ -1.38
COL15A1P39059 OR9N1P-201ENST00000491296 333 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC104629.1-201ENST00000494226 508 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 AC098976.1-201ENST00000513014 541 ntBASIC6.44□□□□□ -1.38
COL15A1P39059 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
COL15A1P39059 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.44□□□□□ -1.38
COL15A1P39059 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL15A1P39059 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.44□□□□□ -1.38
COL15A1P39059 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms