Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.01□□□□□ -1.45
HOXC12P31275 AC011352.3-201ENST00000505162 593 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 AC093878.1-201ENST00000515630 432 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 AC005363.1-201ENST00000530779 351 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 OR4A21P-201ENST00000532759 944 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 AC010487.1-201ENST00000594408 1172 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 AC020914.7-201ENST00000594477 545 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 MIR7973-1-201ENST00000614683 76 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 AC018926.3-201ENST00000618841 406 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 AC016717.3-201ENST00000624730 554 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HOXC12P31275 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 AL133243.4-201ENST00000623116 3109 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 AL034546.1-201ENST00000623740 3693 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC12P31275 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 CASC19-284ENST00000642142 1868 ntBASIC6□□□□□ -1.45
HOXC12P31275 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6□□□□□ -1.45
HOXC12P31275 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HOXC12P31275 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6□□□□□ -1.45
HOXC12P31275 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 AC012020.1-201ENST00000624541 1728 ntBASIC6□□□□□ -1.45
HOXC12P31275 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 SNORD35A-201ENST00000363389 86 ntBASIC6□□□□□ -1.45
HOXC12P31275 Y_RNA.302-201ENST00000364997 102 ntBASIC6□□□□□ -1.45
HOXC12P31275 SNORA75-201ENST00000384158 137 ntBASIC6□□□□□ -1.45
HOXC12P31275 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6□□□□□ -1.45
HOXC12P31275 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 RN7SKP86-201ENST00000410454 332 ntBASIC6□□□□□ -1.45
HOXC12P31275 RN7SKP188-201ENST00000410789 317 ntBASIC6□□□□□ -1.45
HOXC12P31275 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6□□□□□ -1.45
HOXC12P31275 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6□□□□□ -1.45
HOXC12P31275 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6□□□□□ -1.45
HOXC12P31275 RPL7P59-201ENST00000447700 943 ntBASIC6□□□□□ -1.45
HOXC12P31275 RPS7P7-201ENST00000463499 571 ntBASIC6□□□□□ -1.45
HOXC12P31275 RN7SL70P-201ENST00000478322 302 ntBASIC6□□□□□ -1.45
HOXC12P31275 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6□□□□□ -1.45
HOXC12P31275 RN7SL187P-201ENST00000495587 303 ntBASIC6□□□□□ -1.45
HOXC12P31275 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6□□□□□ -1.45
HOXC12P31275 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6□□□□□ -1.45
HOXC12P31275 IMPA1P1-201ENST00000510718 842 ntBASIC6□□□□□ -1.45
HOXC12P31275 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6□□□□□ -1.45
HOXC12P31275 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6□□□□□ -1.45
HOXC12P31275 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6□□□□□ -1.45
HOXC12P31275 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6□□□□□ -1.45
HOXC12P31275 AC087883.1-201ENST00000551882 391 ntBASIC6□□□□□ -1.45
HOXC12P31275 AL358913.1-201ENST00000554342 121 ntBASIC6□□□□□ -1.45
HOXC12P31275 AC037479.1-201ENST00000558361 625 ntBASIC6□□□□□ -1.45
HOXC12P31275 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6□□□□□ -1.45
HOXC12P31275 AC090751.1-201ENST00000566966 267 ntBASIC6□□□□□ -1.45
HOXC12P31275 RN7SL753P-201ENST00000581238 290 ntBASIC6□□□□□ -1.45
HOXC12P31275 MIR4732-201ENST00000581873 76 ntBASIC6□□□□□ -1.45
HOXC12P31275 AC093765.1-201ENST00000603758 881 ntBASIC6□□□□□ -1.45
HOXC12P31275 AC091805.2-201ENST00000603848 235 ntBASIC6□□□□□ -1.45
HOXC12P31275 AL355073.2-201ENST00000612106 557 ntBASIC6□□□□□ -1.45
HOXC12P31275 AL357562.1-201ENST00000624911 609 ntBASIC6□□□□□ -1.45
HOXC12P31275 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6□□□□□ -1.45
HOXC12P31275 AC099654.6-201ENST00000636487 512 ntBASIC6□□□□□ -1.45
HOXC12P31275 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6□□□□□ -1.45
HOXC12P31275 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6□□□□□ -1.45
HOXC12P31275 AC005839.1-201ENST00000624148 3213 ntBASIC6□□□□□ -1.45
HOXC12P31275 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HOXC12P31275 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HOXC12P31275 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6□□□□□ -1.45
HOXC12P31275 AC107982.1-201ENST00000507171 1300 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms