Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.59□□□□□ -1.35
CNGA1P29973 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.59□□□□□ -1.35
CNGA1P29973 AL390726.5-202ENST00000564800 256 ntBASIC6.59□□□□□ -1.35
CNGA1P29973 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.59□□□□□ -1.35
CNGA1P29973 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.59□□□□□ -1.35
CNGA1P29973 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.59□□□□□ -1.35
CNGA1P29973 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.59□□□□□ -1.35
CNGA1P29973 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.59□□□□□ -1.35
CNGA1P29973 AC024060.1-201ENST00000607052 494 ntBASIC6.59□□□□□ -1.35
CNGA1P29973 AL451049.1-201ENST00000608672 497 ntBASIC6.59□□□□□ -1.35
CNGA1P29973 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.59□□□□□ -1.35
CNGA1P29973 RPSAP73-201ENST00000614820 330 ntBASIC6.59□□□□□ -1.35
CNGA1P29973 AC004232.3-201ENST00000622977 525 ntBASIC6.59□□□□□ -1.35
CNGA1P29973 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNGA1P29973 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CNGA1P29973 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNGA1P29973 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.59□□□□□ -1.35
CNGA1P29973 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CNGA1P29973 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
CNGA1P29973 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CNGA1P29973 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CNGA1P29973 AL034546.1-201ENST00000623740 3693 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.58□□□□□ -1.36
CNGA1P29973 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
CNGA1P29973 AC005725.1-201ENST00000577346 2607 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
CNGA1P29973 RN7SKP186-201ENST00000365371 303 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
CNGA1P29973 MIR223-201ENST00000385204 110 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CNGA1P29973 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CNGA1P29973 AC009804.1-201ENST00000400949 179 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 DNAJC19P6-201ENST00000401853 280 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 OR51B3P-201ENST00000412287 913 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.58□□□□□ -1.36
CNGA1P29973 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.58□□□□□ -1.36
CNGA1P29973 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.58□□□□□ -1.36
CNGA1P29973 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.58□□□□□ -1.36
CNGA1P29973 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.58□□□□□ -1.36
CNGA1P29973 AC245047.2-201ENST00000441060 530 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CNGA1P29973 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.58□□□□□ -1.36
CNGA1P29973 AL050341.1-201ENST00000447743 313 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.58□□□□□ -1.36
CNGA1P29973 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 SDC4P-201ENST00000453285 601 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 FRG2FP-204ENST00000453982 852 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 RANP1-206ENST00000455094 651 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 AL355032.1-201ENST00000472981 438 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 RPL7P39-201ENST00000481157 744 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 RN7SL727P-201ENST00000482164 296 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 RPL32P33-201ENST00000487023 394 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.58□□□□□ -1.36
CNGA1P29973 AC108043.1-201ENST00000512696 574 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 CDC42P3-201ENST00000518493 633 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.58□□□□□ -1.36
CNGA1P29973 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.58□□□□□ -1.36
CNGA1P29973 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.58□□□□□ -1.36
CNGA1P29973 AC025260.1-201ENST00000548858 430 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.58□□□□□ -1.36
CNGA1P29973 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.58□□□□□ -1.36
CNGA1P29973 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.58□□□□□ -1.36
CNGA1P29973 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.58□□□□□ -1.36
CNGA1P29973 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.58□□□□□ -1.36
CNGA1P29973 AC015720.2-201ENST00000567709 334 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.58□□□□□ -1.36
CNGA1P29973 AL512329.2-201ENST00000607350 548 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 MIR6748-201ENST00000610433 71 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.58□□□□□ -1.36
CNGA1P29973 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.58□□□□□ -1.36
CNGA1P29973 LINC01808-202ENST00000641680 1116 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 AC140134.1-201ENST00000511830 3544 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CNGA1P29973 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNGA1P29973 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.58□□□□□ -1.36
CNGA1P29973 CASC19-284ENST00000642142 1868 ntBASIC6.58□□□□□ -1.36
CNGA1P29973 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CNGA1P29973 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNGA1P29973 AC093311.1-201ENST00000506586 2021 ntBASIC6.57□□□□□ -1.36
CNGA1P29973 AC025470.1-201ENST00000510053 2032 ntBASIC6.57□□□□□ -1.36
CNGA1P29973 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CNGA1P29973 SEPT7P7-201ENST00000420492 1301 ntBASIC6.57□□□□□ -1.36
CNGA1P29973 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNGA1P29973 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CNGA1P29973 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNGA1P29973 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CNGA1P29973 RNA5SP319-201ENST00000362768 119 ntBASIC6.57□□□□□ -1.36
CNGA1P29973 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CNGA1P29973 AL121835.1-201ENST00000404250 354 ntBASIC6.57□□□□□ -1.36
CNGA1P29973 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms