Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC006967.1-201ENST00000467608 589 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 RPS4XP18-201ENST00000495480 763 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 AC122718.2-201ENST00000505325 591 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 NRBF2P4-201ENST00000520874 850 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 MTND2P13-201ENST00000577438 1039 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 CCDC58P1-201ENST00000578567 430 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 MIR193BHG-214ENST00000641765 509 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 AL672167.1-203ENST00000641299 2975 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 NXF4-202ENST00000416098 1465 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 CR383656.5-201ENST00000547616 1340 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 RN7SKP171-201ENST00000364417 303 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 RNA5SP90-201ENST00000364801 99 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 SLC35E1P1-201ENST00000419313 864 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 RPS29P10-201ENST00000439197 166 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 HLA-DPA3-207ENST00000454398 229 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 FGF7P3-201ENST00000454645 303 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 AP002371.1-201ENST00000463604 433 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 AC060775.1-201ENST00000518241 520 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 AC006512.2-201ENST00000543250 486 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 AC069240.1-201ENST00000548774 375 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 AL512310.9-201ENST00000553311 948 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 RBM22P1-201ENST00000578589 1214 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 VN1R81P-201ENST00000602085 372 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 AC067931.1-201ENST00000624190 671 ntBASIC4.31□□□□□ -1.72
HLA-DMAP28067 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DMAP28067 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMAP28067 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 MAPK10-304ENST00000641341 3984 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 MIR133B-201ENST00000362210 119 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 OR6E1P-201ENST00000414424 923 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC066692.1-201ENST00000421721 457 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 MTCO1P51-201ENST00000427672 1060 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC069154.1-201ENST00000432914 542 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AL353597.2-202ENST00000434901 373 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 AL035551.1-201ENST00000446931 348 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DMAP28067 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMAP28067 RPS26P28-201ENST00000470806 348 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 RPL23AP65-201ENST00000475608 468 ntBASIC4.3□□□□□ -1.72
HLA-DMAP28067 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms