Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.06□□□□□ -1.44
POLR2AP24928 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
POLR2AP24928 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
POLR2AP24928 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 AC004074.1-201ENST00000421810 1063 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AC115285.1-201ENST00000424879 736 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 CDY12P-201ENST00000440679 1015 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 RPL7P33-201ENST00000444159 742 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 CDY13P-201ENST00000445813 1015 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 Z73417.1-201ENST00000447373 778 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 AC091912.1-201ENST00000511351 248 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 SNORA70.11-201ENST00000515987 138 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 SNORA70.13-201ENST00000516116 138 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.06□□□□□ -1.44
POLR2AP24928 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 AC145350.1-201ENST00000567426 208 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AP001357.1-201ENST00000586304 1053 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AC234772.3-201ENST00000602277 528 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AL450226.2-201ENST00000622913 439 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AC011944.2-201ENST00000624440 683 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 DDX6P1-205ENST00000441966 1436 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 LCOR-201ENST00000286067 4542 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
POLR2AP24928 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
POLR2AP24928 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 AC100757.1-201ENST00000616872 1835 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.06□□□□□ -1.44
POLR2AP24928 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
POLR2AP24928 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
POLR2AP24928 SNORA57.1-201ENST00000391227 145 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AC008171.1-201ENST00000395058 200 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 RN7SKP27-201ENST00000410684 333 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 MTCO2P21-201ENST00000419780 677 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.06□□□□□ -1.44
POLR2AP24928 OR2B7P-201ENST00000429302 934 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.06□□□□□ -1.44
POLR2AP24928 ATP5C1P1-201ENST00000441945 895 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.06□□□□□ -1.44
POLR2AP24928 MTND1P29-201ENST00000448112 647 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.06□□□□□ -1.44
POLR2AP24928 RN7SL41P-201ENST00000476144 297 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.06□□□□□ -1.44
POLR2AP24928 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.06□□□□□ -1.44
POLR2AP24928 RN7SKP92-201ENST00000517266 244 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.06□□□□□ -1.44
POLR2AP24928 SOX5P1-201ENST00000524155 1127 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.06□□□□□ -1.44
POLR2AP24928 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
POLR2AP24928 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.06□□□□□ -1.44
POLR2AP24928 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.06□□□□□ -1.44
POLR2AP24928 AC079395.3-201ENST00000615161 484 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 AL590396.4-201ENST00000636779 956 ntBASIC6.06□□□□□ -1.44
POLR2AP24928 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
POLR2AP24928 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
POLR2AP24928 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.05□□□□□ -1.44
POLR2AP24928 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
POLR2AP24928 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.05□□□□□ -1.44
POLR2AP24928 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
POLR2AP24928 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
POLR2AP24928 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
POLR2AP24928 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.05□□□□□ -1.44
POLR2AP24928 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.05□□□□□ -1.44
POLR2AP24928 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
POLR2AP24928 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
POLR2AP24928 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.05□□□□□ -1.44
POLR2AP24928 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
POLR2AP24928 U3.22-201ENST00000391120 215 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 RN7SKP182-201ENST00000410772 298 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 RN7SKP106-201ENST00000410832 272 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
POLR2AP24928 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
POLR2AP24928 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.05□□□□□ -1.44
POLR2AP24928 AC092651.1-201ENST00000426110 312 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 AC007559.1-201ENST00000428736 355 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 BX323845.1-201ENST00000432417 179 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.05□□□□□ -1.44
POLR2AP24928 RNFT1P2-201ENST00000443064 757 ntBASIC6.05□□□□□ -1.44
POLR2AP24928 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms