Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRP01130 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 AC092473.1-201ENST00000441098 221 ntBASIC5.19□□□□□ -1.58
LDLRP01130 Z99127.2-201ENST00000441426 334 ntBASIC5.19□□□□□ -1.58
LDLRP01130 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRP01130 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRP01130 RANP1-206ENST00000455094 651 ntBASIC5.19□□□□□ -1.58
LDLRP01130 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 RPS4XP1-201ENST00000482189 787 ntBASIC5.19□□□□□ -1.58
LDLRP01130 IGBP1P4-201ENST00000503202 879 ntBASIC5.19□□□□□ -1.58
LDLRP01130 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRP01130 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRP01130 RN7SKP66-201ENST00000516681 231 ntBASIC5.19□□□□□ -1.58
LDLRP01130 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 IGLV3-30-201ENST00000524362 298 ntBASIC5.19□□□□□ -1.58
LDLRP01130 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 AP001804.2-201ENST00000533932 910 ntBASIC5.19□□□□□ -1.58
LDLRP01130 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.19□□□□□ -1.58
LDLRP01130 AL158211.1-201ENST00000566763 763 ntBASIC5.19□□□□□ -1.58
LDLRP01130 MIR4260-201ENST00000583107 67 ntBASIC5.19□□□□□ -1.58
LDLRP01130 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.19□□□□□ -1.58
LDLRP01130 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRP01130 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRP01130 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRP01130 AL592494.3-201ENST00000609485 464 ntBASIC5.19□□□□□ -1.58
LDLRP01130 AC006840.1-201ENST00000623069 542 ntBASIC5.19□□□□□ -1.58
LDLRP01130 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.19□□□□□ -1.58
LDLRP01130 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.19□□□□□ -1.58
LDLRP01130 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 SRRM1P3-201ENST00000426911 2678 ntBASIC5.19□□□□□ -1.58
LDLRP01130 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LDLRP01130 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
LDLRP01130 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LDLRP01130 AC097461.1-201ENST00000568928 2821 ntBASIC5.18□□□□□ -1.58
LDLRP01130 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 AC114786.1-201ENST00000512892 1415 ntBASIC5.18□□□□□ -1.58
LDLRP01130 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRP01130 GLUD1P9-201ENST00000420997 1173 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AC073464.3-201ENST00000422564 712 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRP01130 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRP01130 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRP01130 AC012512.1-201ENST00000446594 718 ntBASIC5.18□□□□□ -1.58
LDLRP01130 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRP01130 AURKAPS1-201ENST00000451805 1212 ntBASIC5.18□□□□□ -1.58
LDLRP01130 MTND6P32-201ENST00000457611 483 ntBASIC5.18□□□□□ -1.58
LDLRP01130 EIF2S2P4-201ENST00000461070 984 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AC021660.1-201ENST00000465006 554 ntBASIC5.18□□□□□ -1.58
LDLRP01130 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRP01130 AC072052.1-201ENST00000496556 306 ntBASIC5.18□□□□□ -1.58
LDLRP01130 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRP01130 CAB39P1-201ENST00000502277 460 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRP01130 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRP01130 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRP01130 EIF3KP3-201ENST00000514461 639 ntBASIC5.18□□□□□ -1.58
LDLRP01130 HMGN1P9-201ENST00000515212 298 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRP01130 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRP01130 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRP01130 MRPS16P1-201ENST00000523462 412 ntBASIC5.18□□□□□ -1.58
LDLRP01130 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRP01130 AL049779.2-201ENST00000553847 315 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.18□□□□□ -1.58
LDLRP01130 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRP01130 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRP01130 MIR4311-201ENST00000580794 100 ntBASIC5.18□□□□□ -1.58
LDLRP01130 ELOCP28-201ENST00000590044 317 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AL450270.1-201ENST00000606160 391 ntBASIC5.18□□□□□ -1.58
LDLRP01130 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.18□□□□□ -1.58
LDLRP01130 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 RMST_5.1-201ENST00000618704 126 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AP001784.1-201ENST00000624107 428 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AC136428.4-201ENST00000634254 1155 ntBASIC5.18□□□□□ -1.58
LDLRP01130 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.18□□□□□ -1.58
LDLRP01130 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRP01130 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LDLRP01130 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.18□□□□□ -1.58
LDLRP01130 AC131971.1-201ENST00000332881 1482 ntBASIC5.18□□□□□ -1.58
LDLRP01130 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms