Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN9O95484 LSM3P2-201ENST00000551246 273 ntBASIC4.83□□□□□ -1.64
CLDN9O95484 NMNAT1P1-201ENST00000554095 876 ntBASIC4.83□□□□□ -1.64
CLDN9O95484 AL358913.1-201ENST00000554342 121 ntBASIC4.83□□□□□ -1.64
CLDN9O95484 AL049830.4-201ENST00000555149 351 ntBASIC4.83□□□□□ -1.64
CLDN9O95484 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN9O95484 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN9O95484 AC105254.2-201ENST00000603636 436 ntBASIC4.83□□□□□ -1.64
CLDN9O95484 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.83□□□□□ -1.64
CLDN9O95484 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.83□□□□□ -1.64
CLDN9O95484 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN9O95484 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN9O95484 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLDN9O95484 AC026523.2-201ENST00000625039 7739 ntBASIC4.83□□□□□ -1.64
CLDN9O95484 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CLDN9O95484 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN9O95484 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN9O95484 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN9O95484 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLDN9O95484 AL672167.1-204ENST00000641875 3017 ntBASIC4.83□□□□□ -1.64
CLDN9O95484 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.83□□□□□ -1.64
CLDN9O95484 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CLDN9O95484 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 AC007996.1-201ENST00000620414 2821 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 NXF4-202ENST00000416098 1465 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 CIR1P2-201ENST00000514821 1342 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN9O95484 RNU6-249P-201ENST00000363016 102 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 RNU6-697P-201ENST00000363348 107 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 RNU6-171P-201ENST00000384354 107 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 MIR223-201ENST00000385204 110 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN9O95484 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 AC106901.1-201ENST00000425086 698 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN9O95484 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 AC073052.1-201ENST00000440417 714 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 OR7E125P-201ENST00000443450 846 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 TCEA1P1-201ENST00000449716 880 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.82□□□□□ -1.64
CLDN9O95484 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN9O95484 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN9O95484 RN7SL244P-201ENST00000493405 297 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 AC072052.1-201ENST00000496556 306 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 SNRPCP2-201ENST00000504370 475 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 ENPP7P9-201ENST00000514456 627 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 RNA5SP249-201ENST00000516127 99 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 OR7M1P-201ENST00000608946 533 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
CLDN9O95484 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.82□□□□□ -1.64
CLDN9O95484 ECM1P2-201ENST00000503354 1577 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.82□□□□□ -1.64
CLDN9O95484 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLDN9O95484 MTCO1P15-201ENST00000529569 1526 ntBASIC4.82□□□□□ -1.64
CLDN9O95484 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLDN9O95484 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLDN9O95484 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CLDN9O95484 SYT14P1-202ENST00000600441 1448 ntBASIC4.81□□□□□ -1.64
CLDN9O95484 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CLDN9O95484 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLDN9O95484 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLDN9O95484 AL022393.1-201ENST00000625142 1677 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms