Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
HCN1O60741 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN1O60741 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.82□□□□□ -1.64
HCN1O60741 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN1O60741 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 MTCO1P22-201ENST00000604619 1360 ntBASIC4.82□□□□□ -1.64
HCN1O60741 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HCN1O60741 RPL23P2-201ENST00000320371 421 ntBASIC4.82□□□□□ -1.64
HCN1O60741 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN1O60741 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 MIR105-1-201ENST00000385222 81 ntBASIC4.82□□□□□ -1.64
HCN1O60741 HMGB3P7-201ENST00000400214 611 ntBASIC4.82□□□□□ -1.64
HCN1O60741 AC013470.3-201ENST00000420252 1194 ntBASIC4.82□□□□□ -1.64
HCN1O60741 AC007394.1-201ENST00000421941 531 ntBASIC4.82□□□□□ -1.64
HCN1O60741 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.82□□□□□ -1.64
HCN1O60741 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.82□□□□□ -1.64
HCN1O60741 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.82□□□□□ -1.64
HCN1O60741 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.82□□□□□ -1.64
HCN1O60741 NPM1P39-201ENST00000449818 867 ntBASIC4.82□□□□□ -1.64
HCN1O60741 AL035090.1-201ENST00000454835 332 ntBASIC4.82□□□□□ -1.64
HCN1O60741 Z92846.1-201ENST00000456203 268 ntBASIC4.82□□□□□ -1.64
HCN1O60741 MTCYBP14-201ENST00000457471 715 ntBASIC4.82□□□□□ -1.64
HCN1O60741 AC109462.1-201ENST00000491087 368 ntBASIC4.82□□□□□ -1.64
HCN1O60741 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.82□□□□□ -1.64
HCN1O60741 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.82□□□□□ -1.64
HCN1O60741 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 AC024940.3-201ENST00000538551 316 ntBASIC4.82□□□□□ -1.64
HCN1O60741 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HCN1O60741 AC022884.2-201ENST00000578535 580 ntBASIC4.82□□□□□ -1.64
HCN1O60741 SNORD39.2-201ENST00000579995 76 ntBASIC4.82□□□□□ -1.64
HCN1O60741 AC233702.9-201ENST00000581528 203 ntBASIC4.82□□□□□ -1.64
HCN1O60741 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.82□□□□□ -1.64
HCN1O60741 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.82□□□□□ -1.64
HCN1O60741 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.82□□□□□ -1.64
HCN1O60741 AC008536.1-201ENST00000602872 669 ntBASIC4.82□□□□□ -1.64
HCN1O60741 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN1O60741 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HCN1O60741 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.82□□□□□ -1.64
HCN1O60741 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN1O60741 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN1O60741 AL672167.1-204ENST00000641875 3017 ntBASIC4.82□□□□□ -1.64
HCN1O60741 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.82□□□□□ -1.64
HCN1O60741 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
HCN1O60741 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN1O60741 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HCN1O60741 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HCN1O60741 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HCN1O60741 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.81□□□□□ -1.64
HCN1O60741 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.81□□□□□ -1.64
HCN1O60741 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HCN1O60741 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HCN1O60741 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCN1O60741 RNA5SP305-201ENST00000362665 119 ntBASIC4.81□□□□□ -1.64
HCN1O60741 RNA5SP223-201ENST00000365174 120 ntBASIC4.81□□□□□ -1.64
HCN1O60741 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HCN1O60741 AL078599.1-201ENST00000402075 293 ntBASIC4.81□□□□□ -1.64
HCN1O60741 U3.36-201ENST00000408418 213 ntBASIC4.81□□□□□ -1.64
HCN1O60741 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HCN1O60741 UBE2V2P1-201ENST00000434717 398 ntBASIC4.81□□□□□ -1.64
HCN1O60741 HMGB3P10-201ENST00000434734 572 ntBASIC4.81□□□□□ -1.64
HCN1O60741 AC046176.1-201ENST00000435260 1170 ntBASIC4.81□□□□□ -1.64
HCN1O60741 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.81□□□□□ -1.64
HCN1O60741 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.81□□□□□ -1.64
HCN1O60741 HSPE1P22-201ENST00000456856 327 ntBASIC4.81□□□□□ -1.64
HCN1O60741 AL591473.1-201ENST00000464297 313 ntBASIC4.81□□□□□ -1.64
HCN1O60741 RPL7AP6-201ENST00000477943 801 ntBASIC4.81□□□□□ -1.64
HCN1O60741 RN7SL814P-201ENST00000487715 300 ntBASIC4.81□□□□□ -1.64
HCN1O60741 AC004453.1-201ENST00000487895 408 ntBASIC4.81□□□□□ -1.64
HCN1O60741 RN7SL591P-201ENST00000496150 292 ntBASIC4.81□□□□□ -1.64
HCN1O60741 AC093890.1-201ENST00000502554 540 ntBASIC4.81□□□□□ -1.64
HCN1O60741 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.81□□□□□ -1.64
HCN1O60741 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.81□□□□□ -1.64
HCN1O60741 GTF2F2P1-201ENST00000511083 675 ntBASIC4.81□□□□□ -1.64
HCN1O60741 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.81□□□□□ -1.64
HCN1O60741 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.81□□□□□ -1.64
HCN1O60741 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.81□□□□□ -1.64
HCN1O60741 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.81□□□□□ -1.64
HCN1O60741 AC011447.4-201ENST00000587562 111 ntBASIC4.81□□□□□ -1.64
HCN1O60741 AC009597.2-201ENST00000604659 592 ntBASIC4.81□□□□□ -1.64
HCN1O60741 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.81□□□□□ -1.64
HCN1O60741 AP003499.2-201ENST00000624100 483 ntBASIC4.81□□□□□ -1.64
HCN1O60741 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HCN1O60741 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCN1O60741 HSPA8P18-201ENST00000439846 1928 ntBASIC4.81□□□□□ -1.64
HCN1O60741 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.81□□□□□ -1.64
HCN1O60741 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HCN1O60741 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HCN1O60741 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HCN1O60741 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HCN1O60741 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.8□□□□□ -1.64
HCN1O60741 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.8□□□□□ -1.64
HCN1O60741 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HCN1O60741 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms