Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC146944.4-201ENST00000602697 718 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC005252.1-201ENST00000604518 1063 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AL121890.2-201ENST00000617644 465 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC006386.1-201ENST00000619436 415 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
SMAD6O43541 AP006248.3-201ENST00000623580 594 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC068787.1-201ENST00000623908 691 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.38□□□□□ -1.55
SMAD6O43541 AC099654.8-201ENST00000637757 681 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 SAMMSON-227ENST00000642114 1199 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SMAD6O43541 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.38□□□□□ -1.55
SMAD6O43541 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.38□□□□□ -1.55
SMAD6O43541 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.38□□□□□ -1.55
SMAD6O43541 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.38□□□□□ -1.55
SMAD6O43541 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.38□□□□□ -1.55
SMAD6O43541 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMAD6O43541 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.37□□□□□ -1.55
SMAD6O43541 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.37□□□□□ -1.55
SMAD6O43541 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMAD6O43541 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SMAD6O43541 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMAD6O43541 RNU1-19P-201ENST00000363306 165 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 U8.4-201ENST00000363626 134 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 MIR105-2-201ENST00000385083 81 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SMAD6O43541 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.37□□□□□ -1.55
SMAD6O43541 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.37□□□□□ -1.55
SMAD6O43541 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.37□□□□□ -1.55
SMAD6O43541 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.37□□□□□ -1.55
SMAD6O43541 AC092634.2-201ENST00000428146 1010 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.37□□□□□ -1.55
SMAD6O43541 AC073508.1-201ENST00000428866 656 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.37□□□□□ -1.55
SMAD6O43541 LYPLA1P1-201ENST00000434514 622 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.37□□□□□ -1.55
SMAD6O43541 MTCO2P6-201ENST00000463134 685 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC009127.1-201ENST00000467090 155 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.37□□□□□ -1.55
SMAD6O43541 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMAD6O43541 RPL7P40-201ENST00000481703 745 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.37□□□□□ -1.55
SMAD6O43541 AC119751.5-201ENST00000514077 770 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 FTH1P11-201ENST00000517577 551 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC113192.3-201ENST00000529152 742 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.37□□□□□ -1.55
SMAD6O43541 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.37□□□□□ -1.55
SMAD6O43541 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 AC125612.1-201ENST00000547580 377 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.37□□□□□ -1.55
SMAD6O43541 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.37□□□□□ -1.55
SMAD6O43541 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.37□□□□□ -1.55
SMAD6O43541 AC084759.1-201ENST00000561168 290 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.37□□□□□ -1.55
SMAD6O43541 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.37□□□□□ -1.55
SMAD6O43541 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 AF230666.2-201ENST00000602328 725 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AL445222.1-201ENST00000607259 628 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.37□□□□□ -1.55
SMAD6O43541 AL139407.1-201ENST00000613826 1175 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC009464.1-201ENST00000615731 469 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC009159.2-201ENST00000617603 606 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 AC004808.1-201ENST00000627671 721 ntBASIC5.37□□□□□ -1.55
SMAD6O43541 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMAD6O43541 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMAD6O43541 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMAD6O43541 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMAD6O43541 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.37□□□□□ -1.55
SMAD6O43541 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMAD6O43541 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SMAD6O43541 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SMAD6O43541 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 AC109446.4-201ENST00000623235 2755 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
SMAD6O43541 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMAD6O43541 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SMAD6O43541 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.36□□□□□ -1.55
SMAD6O43541 RNU1-106P-201ENST00000384382 164 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SMAD6O43541 ANAPC10P1-201ENST00000395991 556 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 RNU6-564P-201ENST00000410983 104 ntBASIC5.36□□□□□ -1.55
SMAD6O43541 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.36□□□□□ -1.55
SMAD6O43541 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms