Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNA5SP429-201ENST00000363688 109 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RNA5SP30-201ENST00000365552 115 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL18AP14-201ENST00000417685 526 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC019050.1-201ENST00000418508 492 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL7AP51-201ENST00000422016 760 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC017083.1-201ENST00000428093 483 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL5P7-201ENST00000444235 813 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 WDR82P2-201ENST00000444540 928 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL7P31-201ENST00000450192 724 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RPS7P10-201ENST00000464254 603 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC087385.1-201ENST00000475062 312 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC087672.1-201ENST00000479876 766 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL12P30-201ENST00000488389 499 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RN7SL608P-201ENST00000492377 279 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC018639.1-201ENST00000492994 442 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 KCTD9P2-201ENST00000512203 1013 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 SNORD116-26-201ENST00000516006 96 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC089984.3-201ENST00000552838 363 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL034351.1-201ENST00000605288 668 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RPSAP75-201ENST00000605848 301 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL137000.1-201ENST00000610528 1244 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL713922.2-201ENST00000619384 716 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL357153.4-201ENST00000620487 1016 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 BX005040.2-201ENST00000620504 370 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC068213.1-201ENST00000625124 226 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 OR8G3P-202ENST00000641572 1255 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AL049869.1-201ENST00000556933 1402 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 FAM35DP-201ENST00000323387 2712 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 MFSD8-216ENST00000641147 4009 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC018717.1-201ENST00000457712 1505 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 RN7SKP6-201ENST00000364795 319 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 DBIP1-201ENST00000401435 260 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AL139805.1-201ENST00000407837 289 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AK4P4-201ENST00000419465 646 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AL159169.1-201ENST00000421119 127 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 OR6K4P-201ENST00000423179 955 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 EIF4HP2-201ENST00000424380 563 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC115285.1-201ENST00000424879 736 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC079807.1-201ENST00000429993 481 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL7P4-203ENST00000430239 730 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 ATP5LP4-201ENST00000434169 307 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC006335.2-201ENST00000437993 330 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC004938.1-201ENST00000438468 308 ntBASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC2.63□□□□□ -1.99
CHKB-CPT1BH3BT56 TIMM8BP2-201ENST00000445940 251 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms