Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC104109.1-201ENST00000498563 436 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 USP9YP2-201ENST00000504503 1000 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 USP9YP1-201ENST00000513521 1002 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC006427.1-201ENST00000514359 712 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC126177.5-201ENST00000549599 178 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC127381.1-201ENST00000555979 939 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC010615.3-201ENST00000597319 394 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 WBP1LP8-201ENST00000617401 327 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AL672167.1-204ENST00000641875 3017 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC000374.1-201ENST00000434698 1745 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AP000756.2-201ENST00000624168 2567 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 MIR323A-201ENST00000362199 86 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 RNA5SP223-201ENST00000365174 120 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC007738.1-201ENST00000413892 348 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 OR6K4P-201ENST00000423179 955 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 OR5M12P-201ENST00000423388 929 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 UBE2V2P1-201ENST00000434717 398 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 GAPDHP58-201ENST00000438477 1006 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 HMGB3P9-201ENST00000441799 583 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 RPS26P41-201ENST00000450370 284 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 EIF4A1P11-201ENST00000451239 222 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AL136038.1-201ENST00000497246 351 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 RNA5SP362-201ENST00000516048 118 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC018695.5-201ENST00000605872 315 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC034236.3-201ENST00000605999 461 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 OR7M1P-201ENST00000608946 533 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC015722.2-201ENST00000622210 551 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 AC105105.5-201ENST00000622635 1294 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 CYP4F35P-202ENST00000636121 390 ntBASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RHBDD3Q9Y3P4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 CASC19-284ENST00000642142 1868 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 RNA5SP132-201ENST00000364725 118 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 OR8V1P-201ENST00000395193 873 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC005522.1-201ENST00000395416 346 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 RPS26P47-201ENST00000427219 348 ntBASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.49□□□□□ -1.69
RHBDD3Q9Y3P4 AC009238.2-201ENST00000431026 355 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms