Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC011005.2-201ENST00000487324 359 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RN7SL416P-201ENST00000494042 298 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RPS4XP18-201ENST00000495480 763 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RN7SL792P-201ENST00000496286 305 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 SLC25A15P5-201ENST00000508033 253 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 PGAM4P2-201ENST00000512491 721 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 IGLVIV-59-201ENST00000520218 250 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 SOD1P2-201ENST00000563903 451 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AC098848.2-201ENST00000588023 330 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AC125232.2-201ENST00000592457 143 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 NDUFB9P1-201ENST00000604683 510 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AC093297.3-201ENST00000607056 2517 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AC145138.1-201ENST00000512908 2851 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 RHOT1P2-201ENST00000366423 333 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 SNORA75B-201ENST00000384053 137 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-601P-201ENST00000384540 107 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AL121972.1-201ENST00000402023 252 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 RPL12P27-201ENST00000414870 496 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC093155.2-201ENST00000420734 937 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AL353777.1-201ENST00000425552 326 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 RPL7P4-203ENST00000430239 730 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC098831.1-201ENST00000440661 216 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AL645936.1-201ENST00000441979 518 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 RPL7L1P11-201ENST00000446092 721 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 PRELID1P3-201ENST00000450055 643 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 RN7SL505P-201ENST00000482644 293 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 RPL37P23-201ENST00000492641 294 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC107385.1-201ENST00000507985 778 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-1220P-201ENST00000517126 108 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 IGHVIII-82-201ENST00000522058 250 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC084337.1-201ENST00000524809 686 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AP004247.3-201ENST00000608682 624 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 OR10AB1P-201ENST00000609613 938 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC243773.3-201ENST00000613270 256 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AC011890.2-201ENST00000613393 294 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 AL121835.2-201ENST00000624253 3502 ntBASIC7.85□□□□□ -1.15
VPS9D1Q9Y2B5 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms