Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 RN7SKP124-201ENST00000364730 341 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 RNU1-149P-201ENST00000390870 161 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 RNU2-22P-201ENST00000411266 212 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 Z68694.1-201ENST00000413929 841 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 SDHDP6-201ENST00000414693 480 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC013429.2-201ENST00000418798 781 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AL691447.1-201ENST00000419456 387 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC106901.1-201ENST00000425086 698 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 RPL23AP19-201ENST00000436229 369 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 RPS29P10-201ENST00000439197 166 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 HMGN1P36-201ENST00000446623 298 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AL591363.1-201ENST00000450091 483 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AL356981.1-201ENST00000454879 684 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 C1DP3-201ENST00000455013 423 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC117394.1-201ENST00000477323 567 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 EIF1P7-201ENST00000487533 337 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC133552.5-201ENST00000604266 540 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 LINC00901.1-201ENST00000617252 152 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 MIR8080-201ENST00000622224 89 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC079298.2-201ENST00000623885 459 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 OR10AB1P-202ENST00000641219 1686 ntBASIC4.54□□□□□ -1.68
COPS3Q9UNS2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.54□□□□□ -1.68
COPS3Q9UNS2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 RNU1-94P-201ENST00000362627 173 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC005522.1-201ENST00000395416 346 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 TPTE2P1-204ENST00000435256 593 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 HMGB3P9-201ENST00000441799 583 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AL031584.1-201ENST00000447169 754 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 RPL31P15-201ENST00000449770 338 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC091180.1-201ENST00000462104 372 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 SIAH1P1-201ENST00000479411 923 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 HMGB3P16-201ENST00000508037 287 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC012400.1-201ENST00000518452 381 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AGGF1P9-201ENST00000561884 913 ntBASIC4.53□□□□□ -1.68
COPS3Q9UNS2 AC018552.1-201ENST00000562099 811 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms