Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AC008758.3-201ENST00000507003 1829 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 SOCS5P3-201ENST00000425115 1576 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 CASC19-281ENST00000642118 1554 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AL359922.3-201ENST00000624779 1670 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC008549.2-201ENST00000333482 706 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AL357515.1-201ENST00000402967 542 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 GJA6P-201ENST00000415117 1042 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AL355433.1-201ENST00000422804 300 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 RGS17P1-201ENST00000423358 553 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 NMNAT1P2-201ENST00000435192 860 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 RHOT1P3-201ENST00000436571 331 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AL031584.1-201ENST00000447169 754 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC000111.2-201ENST00000448200 210 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 RHEBP2-201ENST00000450289 600 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC116562.1-201ENST00000485355 781 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC004980.4-201ENST00000513375 203 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 RNA5SP92-201ENST00000516437 110 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 RN7SKP66-201ENST00000516681 231 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 MIR3936-201ENST00000584304 110 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC009163.6-201ENST00000612367 342 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 MIR8069-1-201ENST00000616627 86 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 MIR8069-2-201ENST00000621412 86 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC006453.5-201ENST00000636451 619 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 PCAT14-202ENST00000627127 3935 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 TCP1P3-201ENST00000414406 1498 ntBASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS29Q9UBQ0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 MTCO1P11-201ENST00000429111 1528 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 RNA5SP345-201ENST00000410646 108 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 RN7SKP273-201ENST00000411392 314 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 TBCAP2-201ENST00000416175 326 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 BX284632.1-201ENST00000478218 541 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 AC109462.1-201ENST00000491087 368 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 HAUS8P1-201ENST00000549005 542 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 AP000919.1-201ENST00000582850 985 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 MEMO1P5-201ENST00000604810 406 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 AC010424.2-201ENST00000607594 443 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 AL121612.2-201ENST00000612261 482 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS29Q9UBQ0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS29Q9UBQ0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms